Daily rhythmicity of clock gene transcript levels in fast and slow muscle fibers from Chinese perch (Siniperca chuatsi)

Table 2 Rhythmicity parameters of clock genes and muscle-related genes transcription in Chinese perch slow skeletal muscle

Gene name	Amplitude	P value	Mesor	Acrophase	ZT(h)
arntl1	0.16	0.18	0.24	0.06	0.22
arntl2	0.18	0.29	0.33	5.49	20.96
cry1	0.49	0.01	0.42	5.53	21.12
cry2	0.13	0.64	0.42	6.19	23.65
cry3	0.18	0.084	0.27	5.41	20.66
npas2	0.24	0.25	0.34	0.71	2.69
nr1d1	0.21	0.04	0.48	1.19	4.56
nr1d2	0.19	0.37	0.40	4.99	19.08
per1	0.20	0.03	0.40	5.37	20.53
per2	0.38	0.05	0.48	5.39	20.60
per3	0.19	0.38	0.40	5.10	19.50
rorα	0.25	0.04	0.42	5.69	21.75
tim	0.21	0.21	0.60	0.04	0.16
clock	0.18	0.01	0.34	6.01	22.94
crydash	0.12	0.41	0.33	3.93	15.03
foxk2	0.14	0.29	0.23	5.58	21.32
mbnl1	0.19	0.31	0.31	5.44	20.77
mrf4	0.09	0.29	0.40	0.70	2.67
mstn	0.23	0.28	0.34	0.87	3.32
murf1	0.27	0.31	0.35	5.33	20.34
myf5	0.19	0.09	0.31	5.56	21.23
myoD	0.13	0.42	0.45	5.73	21.90
myoG	0.16	0.32	0.45	0.74	2.81
pdk4	0.16	0.34	0.31	5.96	22.78
pcna	0.26	0.02	0.35	5.25	20.05
ucp3	0.05	0.95	0.39	1.16	4.45

Note: Expression levels of clock genes and muscle-related genes are highlighted in bold while they displayed daily rhythmicity. The P value is defined as the noise/signal ratio of the oscillation amplitude. Daily rhythmicity is indicated when P value is less than 0.3

ISSN: 1471-2164