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Table 4 Putative germination QTLs for SDF and SDS

From: Environmental and genetic effects on tomato seed metabolic balance and its association with germination vigor

 

SDF

SDS

 

%

(se)

T50

(se)

SDplate

(se)

%

(se)

T50

(se)

SDplate

(se)

M82

95.13

(0.89)

2.66

(0.14)

1.00

(0.08)

90.75

(2.75)

3.42

(0.32)

1.82

(0.76)

IL1-1-2

97.33

(1.33)

2.33

(0.33)

0.87

(0.24)

95.94

(2.06)

3.00

(0)

0.92

(0.13)

IL1-1-3

79.24

(4.20)*

5.00

(0.40)***

1.49

(0.22)

93.94

(1.50)

3.08

(0.07)

0.94

(0.13)

IL1-3

87.03

(6.78)

3.00

(0.57)

0.96

(0.14)

76.75

(16.5)

3.83

(0.44)

1.10

(0.45)

IL1-4

76.04

(23.9)

4.00

(1)

1.63

(0.74)

77.00

(23)

4.25

(1.75)

1.56

(0.74)

IL1-4-18

95.99

(1.14)

2.50

(0.28)

1.08

(0.13)

93.78

(2.32)

2.00

(0)***

0.73

(0.22)

IL2-1

91.16

(1.73)

3.00

(0)**

0.73

(0.07)

97.33

(0.66)

2.33

(0.33)

0.47

(0.00)***

IL2-1-1

97.91

(0.08)**

3.00

(0)**

1.41

(0.13)*

100.00

(0)*

2.50

(0.5)

0.93

(0.10)

IL2-2

76.52

(10.3)

3.50

(0.56)

1.35

(0.30)

96.00

(1.54)

3.17

(0.30)

0.98

(0.05)

IL2-3

91.33

(1.33)

3.33

(0.33)

1.27

(0.25)

67.74

(NA)

4.00

(NA)

1.62

(NA)

IL2-5

98.67

(1.33)

3.00

(0.57)

1.14

(0.32)

91.87

(1.04)

3.00

(0)

1.07

(0.08)

IL2-6

98.00

(0)**

3.00

(0)**

0.65

(0.11)

91.00

(1)

3.00

(0)

1.50

(0.18)

IL2-6-5

97.21

(1.83)

3.00

(0)**

0.84

(0.22)

97.96

(2.04)

3.00

(0)

1.01

(0.38)

IL3-1

94.00

(6)

2.50

(0.5)

1.44

(0.17)

90.67

(6.56)

3.67

(0.33)

1.05

(0.24)

IL3-2

86.65

(4.40)

3.38

(0.37)

1.28

(0.49)

98.50

(0.95)*

2.00

(0.40)

0.89

(0.16)

IL3-4

85.71

(0.29)***

4.00

(1)

0.85

(0.29)

99.00

(1)*

4.00

(0)**

1.18

(0.37)

IL3-5

95.97

(1.98)

3.00

(0.57)

1.72

(0.21)*

96.67

(3.33)

3.00

(0.57)

0.87

(0.36)

IL4-1

92.58

(3.29)

3.00

(0)**

2.21

(0.16)***

95.98

(1.97)

3.00

(0)

1.28

(0.06)

IL4-1-1

97.33

(2.66)

3.00

(0)**

0.89

(0.12)

92.00

(4)

3.50

(0.5)

1.29

(0.38)

IL4-2

98.00

(1.15)

3.00

(0.57)

1.21

(0.36)

49.83

(8.16)

8.25

(2.25)

2.40

(0.22)***

IL4-3

92.67

(7.33)

4.67

(1.20)

1.53

(0.63)

95.00

(5)

3.50

(0.5)

1.21

(0.00)

IL4-3-2

93.93

(2.36)

3.33

(0.33)

1.19

(0.34)

90.67

(6.56)

4.33

(0.33)*

1.32

(0.53)

IL5-1

100.00

(NA)

2.00

(NA)

0.86

(NA)

99.00

(1)*

4.00

(0)**

1.26

(0.19)

IL5-3

92.67

(6.35)

4.00

(1)

1.89

(0.61)

91.00

(1)

3.50

(0.5)

1.11

(0.20)

IL5-4

97.00

(1)

3.25

(0.25)

1.23

(0.18)

98.00

(NA)

4.00

(NA)

1.44

(NA)

IL5-5

97.00

(1)

3.00

(0)**

0.43

(0.11)

92.00

(4)

3.33

(0.66)

1.18

(0.05)

IL6-1

80.00

(8.32)

3.33

(0.33)

1.94

(0.22)**

57.92

(19.6)

5.00

(0)***

2.62

(0.07)***

IL6-4

100.00

(0)***

1.68

(0.16)*

1.26

(0.79)

95.33

(2.90)

2.87

(1.10)

0.89

(0.25)

IL7-1

99.33

(0.66)**

2.33

(0.33)

0.65

(0.02)**

100.00

(NA)

2.00

(NA)

0.75

(NA)

IL7-2

96.67

(2.40)

2.00

(0)***

1.02

(0.12)

94.04

(3.96)

2.00

(0)***

0.94

(0.35)

IL7-3

82.83

(12.8)

3.00

(1)

1.23

(0.44)

100.00

(0)*

2.50

(0.5)

0.23

(0.22)

IL7-4

75.10

(8.48)

4.83

(1.16)

1.89

(0.05)***

99.00

(1)*

2.50

(0.5)

1.10

(0.05)

IL7-4-1

98.00

(1.15)

3.00

(0.57)

0.76

(0.14)

96.67

(3.33)

3.33

(0.66)

1.49

(0.02)*

IL7-5

94.67

(2.40)

2.33

(0.33)

1.32

(0.23)

95.92

(4.08)

4.00

(1)

1.68

(1.06)

IL7-5-5

99.00

(1)*

3.00

(0)**

1.22

(0.33)

98.00

(1.15)*

2.67

(0.33)

0.82

(0.16)

IL8-1

96.63

(0.66)

2.33

(0.33)

0.59

(0.13)

90.47

(7.49)

3.00

(0)

1.02

(0.24)

IL8-1-1

98.00

(2)

2.00

(0)***

0.39

(0.04)*

92.00

(NA)

3.00

(NA)

2.05

(NA)

IL8-1-3

99.33

(0.66)**

3.67

(0.33)*

1.39

(0.03)***

97.00

(1)

3.00

(0)

0.98

(0.21)

IL8-2

92.00

(3.05)

3.67

(0.33)*

1.52

(0.18)*

96.67

(0.66)

3.00

(0)

0.93

(0.41)

IL8-2-1

96.00

(4)

3.00

(0)**

1.00

(0.18)

95.16

(0.71)

2.67

(0.33)

1.24

(0.07)

IL8-3

94.44

(5.55)

3.00

(0.57)

1.04

(0.42)

97.92

(2.08)

3.00

(0)

1.23

(0.72)

IL8-3-1

97.22

(0.61)

2.33

(0.33)

0.58

(0.13)

100.00

(0)*

2.33

(0.33)

1.01

(0.23)

IL9-1

95.57

(1.59)

2.40

(0.24)

0.98

(0.22)

75.00

(8.37)

3.40

(0.48)

1.65

(0.30)

IL9-1-2

95.00

(3)

3.00

(0)**

1.49

(0.21)

94.67

(2.90)

3.33

(0.66)

1.73

(0.65)

IL9-1-3

69.12

(6.41)

3.13

(0.24)

1.29

(0.15)

74.56

(13.8)

3.30

(1.15)

1.65

(0.35)

IL9-2

82.67

(11.0)

3.00

(0)**

1.14

(0.19)

93.00

(3)

3.00

(0)

0.64

(0.10)

IL9-2-5

96.00

(2.30)

3.05

(0.62)

0.84

(0.16)

99.00

(1)*

2.00

(0)***

0.43

(0.16)

IL9-2-6

89.90

(0.10)***

5.50

(0.5)*

1.90

(0.29)

74.00

(22)

5.17

(0.44)**

1.83

(0.39)

IL9-3

71.54

(13.3)

4.67

(1.45)

1.64

(0.23)*

78.72

(12.9)

4.00

(1.52)

1.39

(0.54)

IL9-3-1

98.00

(2)

2.75

(0.25)

0.81

(0.03)

100.00

(0)*

3.00

(0)

0.98

(0.53)

IL9-3-2

97.33

(2.66)

3.33

(0.33)

1.71

(0.26)*

95.16

(1.82)

3.67

(0.33)

1.85

(0.35)

IL10-1

92.67

(6.35)

3.67

(0.33)*

1.19

(0.30)

94.00

(NA)

3.00

(NA)

1.19

(NA)

IL10-1-1

85.33

(4.37)

4.00

(0.57)

1.70

(0.12)***

81.33

(6.35)

4.67

(0.88)

2.02

(0.14)**

IL10-2

100.00

(0)***

2.50

(0.5)

0.93

(0.18)

100.00

(NA)

3.00

(NA)

0.81

(NA)

IL10-2-2

93.33

(6.66)

3.00

(1)

0.92

(0.27)

91.17

(7.85)

3.67

(0.66)

1.19

(0.29)

IL10-3

77.35

(9.03)

3.33

(0.88)

1.91

(0.50)

77.71

(6.28)

5.00

(1)

2.35

(0.67)

IL11-2

90.00

(4)

4.50

(0.5)

1.04

(0.29)

96.67

(3.33)

4.00

(1)

1.45

(0.86)

IL11-3

98.67

(1.33)

4.67

(0.33)**

1.66

(0.09)***

88.64

(8.34)

5.00

(0)***

1.73

(0.06)**

IL11-4

100.00

(0)***

3.50

(0.5)

0.68

(0.09)

96.67

(0.66)

3.00

(0)

1.19

(0.42)

IL11-4-1

92.00

(6)

4.00

(0)***

1.32

(0.34)

92.67

(6.35)

4.00

(0.57)

1.35

(0.36)

IL12-1

98.00

(2)

4.00

(1)

1.55

(0.06)***

99.00

(1)*

3.00

(0)

0.75

(0.00)

IL12-1-1

96.96

(0.95)

3.00

(0)**

0.79

(0.23)

90.14

(6.79)

3.00

(0.57)

0.99

(0.11)

IL12-2

91.96

(2.93)

2.77

(0.32)

0.82

(0.10)

88.80

(4.14)

2.44

(0.39)

0.83

(0.14)

IL12-3

89.18

(6.49)

3.67

(0.33)*

1.14

(0.10)

92.00

(NA)

3.00

(NA)

1.01

(NA)

IL12-3-1

96.00

(4)

3.50

(0.5)

1.22

(0.30)

97.92

(2.08)

4.00

(1)

1.18

(0.33)

IL12-4

76.67

(16.3)

4.17

(1.16)

1.80

(0.70)

92.00

(6)

2.50

(0.5)

1.14

(0.13)

IL12-4-1

95.83

(4.16)

3.00

(1)

1.10

(0.44)

94.00

(2)

2.50

(0.5)

0.94

(0.11)

  1. Germination measurements of M82 and ILs with significant differences compared to M82 within the same treatment
  2. Asterisks mark significance levels with the Bcp of * p < 0.05, ** p < 0.01, *** p < 0.001