From: Transcriptome analysis in switchgrass discloses ecotype difference in photosynthetic efficiency
Rice homolog function description | FPKM_ VS16 | FPKM_ lowland | Average Fold change |
---|---|---|---|
AP2 domain-containing protein | 77.5 | 345.0 | 4.4 |
auxin-repressed protein | 55.9 | 341.3 | 53.9 |
BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains | 80.5 | 250.7 | 3.3 |
catalase isozyme A | 30.6 | 330.8 | 30.5 |
FAD-binding and arabino-lactone oxidase domains containing protein | 60.2 | 414.5 | 2081.4 |
glycine rich protein family protein | 202.9 | 554.0 | 2.8 |
heavy-metal-associated domain-containing protein | 60.4 | 238.4 | 4.4 |
helix-loop-helix DNA-binding domain containing protein | 436.7 | 989.7 | 2.3 |
HVA22 | 60.6 | 267.9 | 4.6 |
late embryogenesis abundant group 1 | 0.1 | 671.3 | 4590.7 |
LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor | 123.9 | 853.1 | 7.8 |
magnesium-chelatase | 80.0 | 202.0 | 2.6 |
methyltransferase | 0.5 | 211.7 | 580.0 |
NADP-dependent oxidoreductase | 142.6 | 375.6 | 2.7 |
PHD-finger family protein | 3.1 | 327.5 | 109.5 |
phytosulfokines precursor | 52.7 | 292.6 | 5.7 |
POT family protein | 223.6 | 881.8 | 6.5 |
ribonuclease T2 family domain-containing protein | 143.3 | 857.3 | 88.4 |
S-adenosylmethionine synthetase | 78.6 | 245.7 | 3.3 |
SRC2 protein | 114.4 | 310.0 | 2.8 |
universal stress protein domain containing protein | 148.2 | 327.2 | 2.2 |
wound induced protein | 128.6 | 397.2 | 3.3 |