From: Genome-wide analysis of starch metabolism genes in potato (Solanum tuberosum L.)
Enzyme | PGSC Gene ID | PGSC Transcript ID | iTAG Transcript ID | NCBI Reference Sequence/GenBank | Locus At |
---|---|---|---|---|---|
ADP-glucose pyrophosphorylase large subunit 1 (AGPL1) | PGSC0003DMG400009026 | PGSC0003DMT400023304 | Sotub01g024100.1.1 | NM_001288466.1 | At5g19220 |
ADP-glucose pyrophosphorylase large subunit 2 (AGPL2) | PGSC0003DMG400015952 | PGSC0003DMT400041215 | Sotub07g011850.1.1 | NM_001318669.1 | At1g27680 |
ADP-glucose pyrophosphorylase large subunit 3 (AGPL3) | PGSC0003DMG400000735 | PGSC0003DMT400001935 | Sotub01g047210.1.1 | X61187.1 | At4g39210 |
ADP-glucose pyrophosphorylase small subunit 1.1 (AGPS1.1) | PGSC0003DMG400031084 | PGSC0003DMT400079823 | Sotub07g023520.1.1 | NM_001288195.1 | At5g48300 |
ADP-glucose pyrophosphorylase small subunit 1.2 (AGPS1.2) | PGSC0003DMG400046891 | PGSC0003DMT400097320 | Sotub12g006530.1.1 | Â | At5g48300 |
ADP-glucose pyrophosphorylase small subunit 2 (AGPS2) | PGSC0003DMG400025218 | PGSC0003DMT400064936 | Sotub08g010520.1.1 | Â | At1g05610 |
Alpha-amylase 1.1 (AMY1.1) | PGSC0003DMG400007974 | PGSC0003DMT400020591 | Sotub04g031900.1.1 | M81682.1 | At4g25000 |
Alpha-amylase 1.2 (AMY1.2) | PGSC0003DMG400020603 | PGSC0003DMT400053110 | Sotub03g021150.1.1 | A21347.1 | At4g25000 |
Alpha-amylase 2 (AMY23) | PGSC0003DMG400009891 | PGSC0003DMT400025601 | Sotub04g035480.1.1 | M79328.1 | At1g76130 |
Alpha-amylase 3 (AMY3) | PGSC0003DMG401017626 | PGSC0003DMT400045435 | Sotub05g011310.1.1 | Â | At1g69830 |
Alpha-amylase 3-like (AMY3-like) | Â | Â | Sotub02g012780.1.1 | Â | At1g69830 |
Alpha-glucan phosphorylase 1a (PHO1a) | PGSC0003DMG400007782 PGSC0003DMG400003495 PGSC0003DMG400002479 | PGSC0003DMT400020094 PGSC0003DMT400008970 PGSC0003DMT400006337 | Â | D00520.1 | At3g29320 |
Alpha-glucan phosphorylase 1b (PHO1b) | PGSC0003DMG400028382 | PGSC0003DMT400072963 | Sotub05g005530.1.1 | NM_001288199.1 | At3g29320 |
Alpha-glucan phosphorylase 2a (PHO2a) | chr00:18163346..18176781 | Â | Â | M69038.1 | At3g46970 |
Alpha-glucan phosphorylase 2b (PHO2b) | PGSC0003DMG400031765 | PGSC0003DMT400081273 | Sotub02g020370.1.1 | Â | At3g46970 |
ATP-ADP antiporter 1 (NTT1) | PGSC0003DMG400005612 | PGSC0003DMT400014304 | Sotub03g033540.1.1 | Â | At1g80300 |
ATP-ADP antiporter 2 (NTT2) | PGSC0003DMG400028641 | PGSC0003DMT400073724 | Sotub12g021790.1.1 | NM_001287865.1 | At1g15500 |
Beta-amylase 1 (BAM1) | PGSC0003DMG400001549 | PGSC0003DMT400003933 | Sotub09g026990.1.1 | Â | At3g23920 |
Beta-amylase 2 (BAM2) | PGSC0003DMG400024145 | PGSC0003DMT400062050 | Sotub08g006590.1.1 | Â | At5g45300 |
Beta-amylase 3.1 (BAM3.1) | PGSC0003DMG400001855 | PGSC0003DMT400004686 | Sotub08g023010.1.1 | NM_001288243.1 | At4g17090 |
Beta-amylase 3.2 (BAM3.2) | PGSC0003DMG402020509 | PGSC0003DMT400052839 | Sotub08g006070.1.1 | Â | At4g17090 |
Beta-amylase 4 (BAM4) | PGSC0003DMG400012129 | PGSC0003DMT400031627 | Sotub08g027460.1.1 | Â | Â |
Beta-amylase 6.1 (BAM6.1) | PGSC0003DMG400026199 | PGSC0003DMT400067403 | Sotub07g021140.1.1 | Â | At2g32290 |
Beta-amylase 6.2 (BAM6.2) | PGSC0003DMG400026166 | PGSC0003DMT400067289 | Sotub07g021110.1.1 | Â | At2g32290 |
Beta-amylase 6.3 (BAM6.3) | PGSC0003DMG400026198 | PGSC0003DMT400067400 | Sotub07g021090.1.1 | Â | At2g32290 |
Beta-amylase 7 (BAM7) | PGSC0003DMG400000169 | PGSC0003DMT400000485 | Sotub01g031940.1.1 | Â | At2g45880 |
Beta-amylase 9 (BAM9) | PGSC0003DMG400010664 | PGSC0003DMT400027659 | Sotub01g021680.1.1 | Â | At5g18670 |
Branching enzyme I.1 (SBE1.1) | PGSC0003DMG400022307 | PGSC0003DMT400057446 | Sotub07g029010.1.1 | Â | At3g20440 |
Branching enzyme I.2 (SBE1.2) | Â | Â | Sotub07g025820.1.1 | Â | At3g20440 |
Branching enzyme II (SBE2) | Â | Â | Sotub09g011090.1.1 | NM_001288538.1 | At2g36390 |
Branching enzyme III (SBE3) | PGSC0003DMG400009981 | PGSC0003DMT400025846 | Sotub04g035850.1.1 | NM_001288254.1 | At5g03650 |
Disproportionating enzyme 1 (DPE1) | PGSC0003DMG400016589 | PGSC0003DMT400042739 | Sotub04g021520.1.1 | NM_001287852.1 | At5g64860 |
Disproportionating enzyme 2 (DPE2) | Â | Â | Sotub02g006950.1.1 | NM_001288247.1 | At2g40840 |
Glucan water dikinase (GWD) | PGSC0003DMG400007677 | PGSC0003DMT400019845 | Sotub05g014130.1.1 | NM_001288123.1 | At1g10760 |
Glucose transporter (GLT1) | PGSC0003DMG400026402 | PGSC0003DMT400067884 | Sotub02g029320.1.1 | AF215853.1 | At5g16150 |
Glucose-6-phosphate translocator 1.1 (GPT1.1) | PGSC0003DMG400001041 PGSC0003DMG400005602 | PGSC0003DMT400002701 PGSC0003DMT400014284 | Sotub07g025910.1.1 | Â | At5g54800 |
Glucose-6-phosphate translocator 1.2 (GPT1.2) | Â | Â | Sotub03g008220.1.1 | Â | At1g61800 |
Glucose-6-phosphate translocator 2.1 (GPT2.1) | PGSC0003DMG400005269 | PGSC0003DMT400013500 | Sotub05g021450.1.1 | AF020816.1 | At1g61800 |
Glucose-6-phosphate translocator 2.2 (GPT2.2) | PGSC0003DMG400025495 | PGSC0003DMT400065527 | Â | Â | At1g61800 |
Granule bound starch synthase 1 (GBSS1) | PGSC0003DMG400012111 | PGSC0003DMT400031568 | Sotub08g026990.1.1 | NM_001287989.1 | At1g32900 |
Inorganic pyrophosphatase (PPase) | PGSC0003DMG400003103 | PGSC0003DMT400008028 | Sotub01g043620.1.1 | Â | At5g09650 |
Inorganic pyrophosphatase-like (PPase-like) | PGSC0003DMG400026784 | PGSC0003DMT400068875 | Sotub10g017670.1.1 | Â | At5g09650 |
Isoamylase 1.1 (ISA1.1) | PGSC0003DMG400020699 | PGSC0003DMT400053345 | Â | NM_001288008.1 | At2g39930 |
Isoamylase 1.2 (ISA 1.2) | PGSC0003DMG400030253 | PGSC0003DMT400077770 | Sotub10g015570.1.1 | NM_001288008.1 | At2g39930 |
Isoamylase 2 (ISA2) | PGSC0003DMG400000954 | PGSC0003DMT400002502 | Sotub09g015190.1.1 | NM_001287875.1 | At1g03310 |
Isoamylase 3 (ISA3) | PGSC0003DMG402007274 PGSC0003DMG401007274 | PGSC0003DMT400018766 PGSC0003DMT400018765 | Sotub06g007640.1.1 | NM_001288291.1 | At4g09020 |
Limit dextrinase (LDE) | Â | Â | Sotub11g012510.1.1 Sotub11g012520.1.1 Sotub11g012530.1.1 Sotub11g012540.1.1 | Â | At5g04360 |
Maltose excess 1 (MEX1) | PGSC0003DMG400024812 | PGSC0003DMT400063824 | Sotub04g024480.1.1 | Â | At5g17520 |
Phosphoglucan phosphatase (like SEX four 1, LSF1) | PGSC0003DMG400030092 | PGSC0003DMT400077364 | Sotub12g017200.1.1 | Â | At3g01510 |
Phosphoglucan phosphatase (like SEX four 2, LSF2) | PGSC0003DMG400029073 | PGSC0003DMT400074765 | Sotub06g009920.1.1 | Â | At3g10940 |
Phosphoglucan phosphatase (SEX4) | PGSC0003DMG400015246 | PGSC0003DMT400039423 | Sotub03g023920.1.1 | NM_001318586.1 | At3g52180 |
Phosphoglucan phosphatase (SEX4-like) | PGSC0003DMG400027327 | PGSC0003DMT400070294 | Sotub11g010680.1.1 | NM_001318586.1 | At3g52180 |
Phosphoglucan water dikinase (PWD) | PGSC0003DMG400016613 | PGSC0003DMT400042818 | Sotub09g030460.1.1 | NM_001287941.1 | At5g26570 |
Phosphoglucoisomerase (PGI) | PGSC0003DMG400012910 | PGSC0003DMT400033620 | Sotub04g029550.1.1 | NM_001247654.3 | At4g24620 |
Phosphoglucoisomerase-like 1 (PGI-like1) | PGSC0003DMG400015341 | PGSC0003DMT400039665 | Sotub12g005010.1.1 | NM_001288294.1 | At5g42740 |
Phosphoglucoisomerase-like 2 (PGI-like2) | PGSC0003DMG400030128 | PGSC0003DMT400077470 | Â | Â | Â |
Phosphoglucomutase 1 (PGM1) | Â | Â | Sotub03g007170.1.1 | NM_001288352.1 | At5g51820 |
Phosphoglucomutase 2.1 (PGM2.1) | Â | Â | Sotub07g017160.1.1 | NM_001288404.1 | At1g23190 |
Phosphoglucomutase 2.2 (PGM2.2) | chr04:35711900..35685400 | Â | Â | Â | At1g23190 |
Putative Phosphoglucomutase (pPGM) | Â | Â | Sotub05g017780.1.1 | Â | At1g70820 |
Starch Synthase I (SS1) | PGSC0003DMG402018552 | PGSC0003DMT400047731 | Sotub03g013130.1.1 | NM_001288145.1 | At5g24300 |
Starch Synthase II (SS2) | PGSC0003DMG400001328 | PGSC0003DMT400003356 | Sotub02g034860.1.1 | NM_001288048.1 | At3g01180 |
Starch Synthase III (SS3) | PGSC0003DMG400016481 | PGSC0003DMT400042496 | Sotub02g023740.1.1 | X94400.1 | At1g11720 |
Starch Synthase IV (SS4) | PGSC0003DMG400008322 | PGSC0003DMT400021444 | Sotub02g017380.1.1 | Â | At4g18240 |
Starch Synthase V (SS5) | PGSC0003DMG400030619 | PGSC0003DMT400078688 | Sotub02g030260.1.1 | NM_001288111.1 | At5g65685 |
Starch Synthase VI (SS6) | PGSC0003DMG402013540 | PGSC0003DMT400035218 | Sotub07g015820.1.1 | NM_001247458.1 | Â |
Sucrose Synthase 1 (SuSy1) | PGSC0003DMG400013547 | PGSC0003DMT400035264 | Sotub07g016120.1.1 | Â | At5g20830 |
Sucrose Synthase 2 (SuSy2) | PGSC0003DMG400013546 | PGSC0003DMT400035262 | Sotub07g016110.1.1 | NM_001287982.1 | At5g49190 |
Sucrose Synthase 3 (SuSy3) | PGSC0003DMG400006672 | PGSC0003DMT400017087 | Â | NM_001288308.1 | At4g02280 |
Sucrose Synthase 4 (SuSy4) | PGSC0003DMG400002895 | PGSC0003DMT400007506 | Sotub12g008670.1.1 | M18745.1 | At3g43190 |
Sucrose Synthase 6 (SuSy6) | PGSC0003DMG400031046 | PGSC0003DMT400079728 | Sotub03g023000.1.1 | Â | At1g73370 |
Sucrose Synthase 7 (SuSy7) | PGSC0003DMG400016730 | PGSC0003DMT400043117 | Sotub02g024410.1.1 | Â | At5g37180 |
Triose-phosphate/phosphate translocator (TPT) | PGSC0003DMG400022832 | PGSC0003DMT400058772 | Sotub10g009470.1.1 | NM_001287896.1 | At5g46110 |
Triose-phosphate/phosphate translocator-like (TPT-like) | Â | Â | Sotub01g020040.1.1 | Â | At5g46110 |
UDP-glucose pyrophosphorylase 1 (UGPase1) | Â | Â | Sotub05g026990.1.1 | Â | At3g03250 |
UDP-glucose pyrophosphorylase 2 (UGPase2) | PGSC0003DMG401013333 | PGSC0003DMT400034699 | Sotub11g007290.1.1 | NM_001288019.1 | At5g17310 |
Vacuolar Glucose Transporter 3-like (VGT3-like) | PGSC0003DMG401010374 | PGSC0003DMT400026885 | Sotub03g022010.1.1 | Â | At5g59250 |