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Table 1 Pseudoalteromonas dataset

From: The pangenome of (Antarctic) Pseudoalteromonas bacteria: evolutionary and functional insights

Strain Contigs/Replicons Total length ORFs % GC Origin PID Accession number Pigmentation
Pseudoalteromonas sp. AC163 565 4779003 4765 39.10 Haliclonissa verrucosa. Antarctica - AUTK01000000 NO
P. arctica A 37 1 2 uid168325 68 4628018 4094 39.04 Seawater. Arctic 18768597 AHBY02000000 NO
P. atlantica T6c uid58283 1 5187005 4281 44.62 Seawater. California - AAKP01000000 YES
Pseudoalteromonas sp. BSi20311 uid78647 195 3979836 3676 40.33 - - BADU01000000 NO
Pseudoalteromonas sp. BSi20429 uid78649 121 4495777 4030 39.04 - - BADV01000000 NO
Pseudoalteromonas sp. BSi20439 uid78651 243 3882800 3612 40.22 - - BADW01000000 NO
Pseudoalteromonas sp. BSi20480 uid78653 201 4149214 3967 39.60 - - BADX01000000 NO
Pseudoalteromonas sp. BSi20495 uid78655 222 4826524 4365 38.92 - - BADY01000000 NO
Pseudoalteromonas sp. BSi20652 uid78645 298 4253936 4085 38.86 - - BADT01000000 NO
Pseudoalteromonas sp. Bsw20308 uid179221 146 4757001 4172 38.90 Chukchi Sea. China - AMYA01000000 NO
P. citrea NCIMB 1889 uid168326 114 5337619 4438 41.13 - 22535931 AHBZ02000000 YES
P. flavipulchra JG1 uid177806 61 5503991 4758 43.19 Rearing water 22740664 AJMP01000000 YES
P. haloplanktis ANT 505 uid66747 142 4494717 4127 39.32 Seawater. Antarctica - ADOP01000000 NO
P. haloplanktis ATCC 14393 uid198981 56 6513609 4329 40.84 - 22535931 AHCA01000000 NO
P. haloplanktis TAC125 uid58431 2 3850272 3484 40.09 Seawater. Antarctica 16169927 CR954246 NO
P. luteoviolacea B ATCC 29581 uid186644 61 4046270 3681 41.95 Kinko Bay. Japan 23516191 CAPN01000000 YES
P. marina mano4 uid168327 31 4177200 3711 39.65 tidal sediments. Korea - AHCB02000000 NO
Pseudoalteromonas sp. NJ631 uid199000 55 6943067 4591 43.36 Hymeniacidon perlevis. China - AKXJ01000000 NA
Pseudoalteromonas sp. PAMC 22718 uid179404 56 5425171 3821 40.17 Seawater. Arctic 22815453 AJTK01000000 NO
P. piscicida JCM 20779 uid168328 73 5281621 4524 43.24 Red tide seawater Florida 22535931 AHCC02000000 YES
P. rubra ATCC 29570 uid168329 64 5969931 4893 47.80 - 22374963 AHCD02000066 YES
P. ruthenica CP76 uid199935 120 5225945 3714 47.59 Saltern. Spain 23704184 AOPM01000000 YES
Pseudoalteromonas sp. S8-38 87 4990009 4427 39.19 Sediment. Antarctica - AUTS01000000 NO
Pseudoalteromonas sp. S8-8 79 4911233 4371 39.21 Sediment. Antarctica - AUTR01000000 NO
Pseudoalteromonas sp. SM9913 uid61247 2 4037671 3712 40.28 Sediment. Japan 20703316 NC_014803 NO
P. spongiae UST010723 006 uid168330 14 4724746 4185 40.81 Mycale adhaeren. China 22535931 AHCE02000000 YES
Pseudoalteromonas sp. TAB23 367 5139089 5012 39.11 Seawater. Antarctica - AUTP01000000 NO
P. haloplanktis TAC125 216 3888065 3740 39.98 Seawater. Antarctica - - NO
Pseudoalteromonas sp. TAE56 163 4600700 4258 39.03 Seawater. Antarctica - AUTN00000000 NO
Pseudoalteromonas sp. TAE79 298 5045088 4940 39.29 Seawater. Antarctica - AUTL01000000 NO
Pseudoalteromonas sp. TAE80 360 4971170 4941 39.29 Seawater. Antarctica - AUTM01000000 NO
Pseudoalteromonas sp. TB13 254 4734094 4489 39.05 L. nobilis. Antarctica - AUTJ01000000 NO
Pseudoalteromonas sp. TB25 458 4648658 4546 39.18 L. nobilis. Antarctica - AUTI01000000 NO
Pseudoalteromonas sp. TB41 122 4632606 4217 40.34 A. joubini. Antarctica - AUTH00000000 NO
Pseudoalteromonas sp. TB51 369 4633324 4625 40.91 A. joubini. Antarctica - AUTO00000000 NO
Pseudoalteromonas sp. TB64 275 4843680 4649 37.92 A. joubini. Antarctica - AUTQ00000000 NO
P. tunicata D2 uid54181 37 4994813 4504 39.75 C. intestinalis. Sweden - AAOH01000000 YES
P. undina NCIMB 2128 uid168331 20 4001234 3581 39.95 Seawater. California - AHCF02000000 NO
Average:   4802755 4245 40.53     
  1. This table reports the main features of the Pseudoalteromonas genomes