Table 4 Regression analysis between carotenoid genes and yellow index and yellow pigment content in a tetraploid wheat collection evaluated in six and two environments, respectively
From: The carotenoid biosynthetic and catabolic genes in wheat and their association with yellow pigments
Gene | SNP id | Wheat map position | Yellow Index | Yellow Pigment Content | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Â | Chrom. | Durum map | Bread map | -log10(P) | Effect | R2 | -log10(P) | Effect | R2 | |
PSY1 | IWB6923 | 7AL | 203.2 | - | 9.2*** | 1.37 | 16.8 | 5.2*** | 1.30 | 9.9 |
PSY2 | IWB2660 | 5AS | - | 15.6 | ns | Â | Â | ns | Â | Â |
| Â | IWB58766 | 5AS | - | 15.6 | 3.7** | 0.83 | 5.9 | ns | Â | Â |
| Â | IWB24947 | 5BS | - | 19.7 | 4.7*** | 0.93 | 7.9 | ns | Â | Â |
| Â | IWB42850 | 5BS | - | 19.7 | 4.3** | 0.90 | 7.0 | ns | Â | Â |
| Â | IWB33289 | 5BS | - | 19.7 | 4.3** | 0.88 | 7.0 | ns | Â | Â |
BCH1 | IWB2683 | 2AL | 133.3 | - | 9.6*** | 1.49 | 16.00 | 6.7*** | 1.56 | 12.1 |
| Â | IWB64290 | 2BL | - | - | ns | Â | Â | 4.2** | 1.63 | 7.4 |
CYP97A3 | IWB72540 | 6BL | 145.3 | 108.9 | ns | Â | Â | ns | Â | Â |
| Â | IWB13062 | 6BL | 145.3 | - | 5.8*** | 0.93 | 9.7 | 6.8*** | 1.25 | 12.4 |
VDE | IWA1533 | 2AL | - | - | 9.4*** | 1.71 | 15.8 | 6.7*** | 1.97 | 12.1 |
ABA2 | IWB64707 | 5BL | 157.5 | 137.1 | 9.2*** | -1.34 | 16.3 | 7.7*** | 1.51 | 14.8 |
AAO3 | IWB59875 | 7AL | 180.3 | - | 3.8** | -0.86 | 6.5 | ns | Â | Â |
| Â | IWB39660 | 7BL | 155.7 | 120.8 | 3.8** | 0.79 | 6.4 | ns | Â | Â |