Table 3 Soybean QTLs and candidate genes for the peak SNPs found for the 7 soybean traits
From: A genome-wide association study of seed composition traits in wild soybean (Glycine soja)
TRAIT | SNP | CHR | BP | Previous QTLs | Gene ID |
|---|---|---|---|---|---|
PROTEIN | ss715617976 | 14 | 24367698 | Â | Â |
PROTEIN | ss715631057 | 18 | 45438677 | [57] | |
OIL | ss715585518 | 3 | 34839398 | Â | |
OIL | ss715637730 | 20 | 36705945 | [58] | Glyma.20G124700.1 |
OIL | ss715637732 | 20 | 36710220 | [58] | Glyma.20G124700.1 |
PALMITIC ACID | ss715595323 | 6 | 5303094 | Â | Â |
PALMITIC ACID | ss715597684 | 7 | 37911072 | Â | |
PALMITIC ACID | ss715617910 | 14 | 22537916 | Â | |
STEARIC ACID | ss715618427 | 14 | 17499955 | [59] | Glyma.14G121400.1 |
STEARIC ACID | ss715618430 | 14 | 17561477 | [59] | Â |
STEARIC ACID | ss715625341 | 16 | 6804502 | Â | Glyma.16G068500.1 |
OLEIC ACID | ss715596070 | 7 | 11603310 | [60] | Â |
OLEIC ACID | ss715617910 | 14 | 22537916 | Â | |
OLEIC ACID | ss715623399 | 16 | 1258943 | Â | |
OLEIC ACID | ss715623400 | 16 | 1260003 | Â | |
OLEIC ACID | ss715633271 | 19 | 12874336 | Â | |
LINOLEIC ACID | ss715582510 | 2 | 39934224 | Â | |
LINOLEIC ACID | ss715582512 | 2 | 39940256 | Â | |
LINOLEIC ACID | ss715596075 | 7 | 11584261 | Â | Glyma.07G112100.1 |
LINOLEIC ACID | ss715596074 | 7 | 11585878 | Â | Glyma.07G112100.1 |
LINOLEIC ACID | ss715596072 | 7 | 11592971 | Â | Â |
LINOLEIC ACID | ss715596071 | 7 | 11602516 | Â | |
LINOLEIC ACID | ss715596070 | 7 | 11603310 | Â | |
LINOLEIC ACID | ss715596058 | 7 | 11756838 | Â | |
LINOLEIC ACID | ss715604488 | 9 | 44197778 | Â | Glyma.09G218700.1 |
LINOLENIC ACID | ss715583655 | 2 | 573749 | Â | Â |
LINOLENIC ACID | ss715583662 | 2 | 578327 | Â | Glytma.02G005200.1 |
LINOLENIC ACID | ss715617909 | 14 | 22514991 | [60] | Â |
LINOLENIC ACID | ss715617910 | 14 | 22537916 | [60] |