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Fig. 5 | BMC Genomics

Fig. 5

From: ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data

Fig. 5

Chimeric gene pairs predicted by the 5 programs on the two real datasets. Intersection between chimeric gene pairs predicted by the 5 programs on the Berger set a and on the Edgren set b are represented as Venn diagrams. In general gene pairs predicted by all 5 programs are few compared to the gene pairs predicted by a single program, and we expect that the higher the number of programs predicting a gene pair the more reliable the gene pair. Chimerascan and TophaFusion are the programs that predict more gene pairs predicted by no other program, while PRADA, Chimpipe and FusionMap are the programs with less such gene pairs. CP: ChimPipe, FM: FusionMap, PR: PRADA, CS: Chimerascan, THF: TopHatFusion

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