Table 1 Number of reads in the infected and non-infected groups
Item | Infected | Non-infected |
|---|---|---|
Total read | 12,476,156 | 10,866,976 |
Clean data | 5,078,218 | 2,411,757 |
Exact matched reads | 3,456,099 | 1,722,678 |
1-mismatch reads | 525,400 | 149,372 |
2 mismatch reads | 108,131 | 47,761 |
Total matched reads | 4,089,630 | 1,919,811 |