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Fig. 4 | BMC Genomics

Fig. 4

From: De novo transcriptome analysis of rose-scented geranium provides insights into the metabolic specificity of terpene and tartaric acid biosynthesis

Fig. 4

Schematic representation of terpene biosynthetic pathway, and heatmaps displaying the expression (log2 FPKM) of enzymes involved in the different reaction steps. The details of the transcripts are given in Additional file 6. AACT, acetoacetyl-CoA thiolase/acetyl-CoA acetyltransferase; HMGS, hydroxymethylglutaryl- CoA synthase; HMGR, hydroxymethylglutaryl-CoA reductase; MVK, mevalonate kinase; PMK, phosphomevalonate kinase; MVD, mevalonate diphosphate decarboxylase; DXS, 1-deoxy- D -xylulose 5-phosphate synthase; DXR, 1-deoxy- D -xylulose 5-phosphate reductoisomerase; MCT, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; CMK, 4-(cytidine 5′-diphospho)-2-C-methyl-D-erythritol kinase; MDS, 2-C-methyl- D -erythritol 2,4-cyclodiphosphate synthase; HDS, (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase; HDR, (E)-4-hydroxy-3-methylbut-2-enyl diphosphatereductase; GPPS, geranyl diphosphate synthase; IDI, isopentenyl-diphosphate delta isomerase; FPPS, farnesyl pyrophosphate synthase; GGPPS, geranylgeranyl diphosphate synthase; MTPS, mono-terpene synthase; STPS, sesqui-terpene synthase; DTPS, di-terpene synthase; HMG, CoA, hydroxymethylglutaryl-CoA; IPP, isopentenyl pyrophosphate; DMAPP, dimethylallyl pyrophosphate; GA-3P, glyceraldehyde 3-phosphate; DXOP, 1-deoxy-D-xylulose-5-phosphate; MEP, 2-C-methyl-d-erythritol-phosphate; CDP-ME, 4-(cytidine5′ -diphospho)-2-C-methyl-d-erythritol; CDP-ME2P, 2-phospho 4- (cytidine 5′-diphospho)2-c-methyl-d-erythritol; ME 2,4 cPP, C-methyl-D-erythritol 2,4-cyclodiphosphate; HMBPP, 1-hydroxy-2-methyl-2-butenyl 4-diphosphate; GPP, geranyl pyrophosphate; FPP, farnesyl pyrophosphate; GGPP, geranylgeranyl pyrophosphate; MVA, mevalonic acid

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