Table 2 Statistics of SSRs discovered and various classes of SSR repeat motifs in rose-scented geranium transcriptome
Parameters | Counts | Motifs | Number of contigs |
|---|---|---|---|
Total number of sequences examined | 78943 | Mono-nucleotides | 1145 |
Total number of identified SSRs | 6040 | Di-nucleotides | 1699 |
Number of SSR containing sequences | 5380 | Tri-nucleotides | 3011 |
Number of sequences containing more than one SSR | 571 | Tetra-nucleotides | 71 |
Number of SSRs present in compound formation | 316 | Penta-nucleotides | 52 |
Hexa-nucleotides | 62 |