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Fig. 4 | BMC Genomics

Fig. 4

From: Elucidation of the molecular responses of a cucumber segment substitution line carrying Pm5.1 and its recurrent parent triggered by powdery mildew by comparative transcriptome profiling

Fig. 4

Expression patterns of expressed cucumber genes. a Hierarchical cluster of expressed cucumber genes in 12 samples. In the color panels, each vertical line represents a single gene and the color of the line indicates the expression level of the gene relative to the mean center in a specific sample: high expression level in red, low expression level in green. ID = inoculated D8, NID = non-inoculated control D8, IS = inoculated SSL508-28, NIS = non-inoculated control SSL508-28 and FPKM = fragments per kilobase million. b Venn diagram showing the distribution of differentially expressed genes. ‘ID vs NID up’ stands for genes upregulated in D8 48 h after PM inoculation when compared with its un-inoculated control; ‘ID vs NID down’ stands for genes downregulated in D8 48 h after PM inoculation when compared with its un-inoculated control. ‘IS vs NIS up’ stands for genes upregulated in SSL508-28 48 h after PM inoculation when compared with its control; ‘IS vs NIS down’ stands for genes downregulated in SSL508-28 48 h after PM inoculation when compared with its control. c Distribution of differentially expressed genes (DEGs) on each chromosome of cucumber

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BMC Genomics

ISSN: 1471-2164

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