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Table 3 Significantly downregulated contigs

From: The transcriptome of the mosquito Aedes fluviatilis (Diptera: Culicidae), and transcriptional changes associated with its native Wolbachia infection

Component number

Name

RPKM - wFlu

RPKM - Tet

Function

1. Membranes & membrane transport

  comp7683_c0_seq2

  Membrane glycoprotein lig-1

7.27

22.40

Membrane receptor

  comp3093_c0_seq1

  EGF-like module-containing mucin-like hormone receptor-like 1

2.09

11.49

Membrane receptor

   comp1729_c0_seq1

   ABC transporter ATP-binding protein

0.33

4.41

Transmembrane transport

2. Redox response

  comp5605_c0_seq1

  Anterior fat body protein

16.34

36.66

Redox process

  comp8781_c0_seq2

  Dimethylaniline monooxygenase

0.42

2.93

Redox process

3. Metabolism

  comp5123_c0_seq1

  Serine protease 14

85.21

201.81

Proteolysis

  comp8292_c1_seq1

  Galactose-specific C-type

66.95

145.97

Carbohydrate metabolism

  comp10957_c0_seq1

  Serine protease

47.69

111.75

Proteolysis

  comp8332_c0_seq1

  Diacylglyceride synthesis protein

20.73

48.52

Fat synthesis

  comp5605_c0_seq1

  Anterior fat body protein

16.34

36.66

Lipoprotein

  comp7785_c0_seq8

  Glucosamine 6-phosphate N-acetyltransferase, putative

10.17

23.93

Amino acid/aminosugar metabolism

  comp14516_c0_seq1

  Zinc metalloprotease

0.71

12.68

Proteolysis

  comp9411_c0_seq5

  Carboxylesterase

1.78

7.61

Hydrolase

  comp2544_c0_seq1

  Vitellogenic carboxypeptidase

0.80

6.73

Proteolysis

  comp16467_c0_seq1

  Zinc metallopeptidase

0.00

4.09

Proteolysis

  comp17222_c0_seq1

  Acyltransferase

0.25

3.39

Protein modification

4. Signalling

  comp9906_c0_seq1

  CDC42 protein

11.93

69.66

GTPase

  comp11677_c0_seq3

  Dual specificity tyrosine-phosphorylation-regulated kinase

13.96

31.43

TPR Kinase

  comp7548_c0_seq2

  Calmodulin-like protein 4-like

13.13

30.04

Signal transduction

  comp5282_c0_seq1

  Signal peptidase complex subunit 1

5.76

26.11

Signal protein cleavage

  comp11677_c0_seq2

  Dual specificity tyrosine-phosphorylation-regulated kinase

13.17

25.49

TPR Kinase

  comp10289_c0_seq6

  Guanine nucleotide-binding protein subunit

5.47

16.12

Signal protein

  comp9283_c0_seq2

  GTP-binding protein alpha gna

1.08

4.54

GTPase

5. Cell Process

  comp14155_c0_seq1

  T-complex polypeptide 20

0.94

25.10

Protein folding

  comp8487_c0_seq1

  Histone h1

6.28

18.53

DNA binding

  comp4291_c0_seq2

  RNase h and integrase-like protein

3.25

15.80

DNA repair

  comp6475_c0_seq2

  Insulin receptor tyrosine kinase substrate

0.21

3.09

Cytoskeleton organization

6. Physiology

  comp13996_c0_seq1

  Rhodopsin receptor 1

3383.34

7140.82

Visual receptor

  comp9690_c0_seq8

  Photoreceptor protein

1087.17

2438.80

Phototransduction

  comp8001_c0_seq1

  Ultraviolet-sensitive opsin

78.20

207.73

Visual receptor

  comp12700_c0_seq1

  Calmodulin-binding protein trpl

41.91

101.60

Phototransduction

  comp9621_c0_seq1

  Blue-sensitive visual pigment

16.68

56.19

Phototransduction

  comp3173_c0_seq1

  Rhodopsin

19.70

51.63

Visual receptor

  comp2653_c0_seq1

  Mucin-like peritrophin

11.81

39.14

Petritrophic matrix component

  comp8706_c0_seq1

  Cuticular protein isoform a

1.62

10.60

Cuticle component

  comp4000_c0_seq1

  Photoreceptor protein

0.00

8.21

Phototransduction

  comp5558_c0_seq1

  Hypothetical protein ZHAS

0.43

3.63

Cell growth

7. Immunity

  comp8292_c1_seq1

  Galactose-specific C-type lectin

66.95

145.97

Pathogen binding

  comp3093_c0_seq1

  EGF-like module-containing mucin-like hormone receptor-like 1

2.09

11.49

Immune signalling

8. Salivary proteins

  comp6651_c0_seq1

  Short form d7 salivary protein sd7-1

39.94

79.53

Salivary protein

  comp6296_c0_seq4

  Short form d7 salivary protein sd7-1

4.35

18.17

Salivary protein

9. Mobile elements

  comp14966_c0_seq1

  af377999_1 transposase

1.08

6.80

DNA integration

  comp334_c0_seq2

   line-1 retrotransposon-like

0.00

6.43

DNA integration

  comp4558_c0_seq2

  bel12_ag transposon polyprotein

1.60

5.48

Polyprotein

  comp13589_c0_seq12

  Uncharacterized protein K02A2.6-like

1.25

5.23

DNA integration

  comp4787_c0_seq1

  bel12_ag transposon polyprotein

1.16

4.89

Polyprotein

  1. Contigs in italics are of bacterial origin. FPKM - Fragments Per Kilobase of transcript per Million mapped reads for the wFlu and Tet libraries