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Fig. 1 | BMC Genomics

Fig. 1

From: Domestication of rice has reduced the occurrence of transposable elements within gene coding regions

Fig. 1

Comparative genomics of the eight AA-genome Oryza species. a Phylogenetic relationship of the eight AA-genome Oryza species inferred from orthologous gene sequences. Estimates of divergence time (million years) are given at each node (6.5 × 10−9 substitutions per site per year), all supported with 100% bootstrap values. b Comparative genome analysis. Each line in the circle represents one of the 12 chromosomes of Oryza genomes, along with the number of all TEs (blue) and TEs in genes (red). And the slide window size is 100,000 bp. c Blown-up image of Chr1 for six of the rice species

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