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Fig. 1 | BMC Genomics

Fig. 1

From: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri

Fig. 1

Comparison of estimates of genetic diversity derived from cross-species (developed for Arabidopsis thaliana) and species-specific microsatellite markers (developed for Arabidopsis halleri) for a allelic richness (A r, p < 0.0001, paired t-test) and b expected microsatellite heterozygosity (SSR-H e, p < 0.0001, paired t-test). c Estimates of SSR-H e inferred separately from cross-species and species-specific microsatellite markers were not significantly correlated (Pearson’s r = 0.439, p = 0.237). Dots are labelled with population codes (Additional file 1: Table S1). d No significantly different estimates of H e were observed among populations after Bonferroni correction (pairwise Wilcoxon signed-rank test). Without correction for multiple testing only population Aha11 and AhaN3 showed significantly different estimates of H e (indicated with different colouring and letters)

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BMC Genomics

ISSN: 1471-2164

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