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Table 2 Model performance

From: Enumerateblood – an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles

Cell type 20x 10-fold cross-validation Independent test set
  RMSE (mean ± sd) Pearson’s r (mean ± sd) RMSE (n) Pearson’s r (n)
Bcell 0.021 ± 0.007 0.755 ± 0.188 0.04 (28) 0.93 (28)
CD4T 0.038 ± 0.01 0.813 ± 0.09 0.06 (28) 0.91 (28)
CD8T 0.034 ± 0.006 0.683 ± 0.138
Gran 0.054 ± 0.013 0.923 ± 0.046 0.06 (197) 0.89 (197)
Mono 0.018 ± 0.003 0.842 ± 0.068 0.02 (197) 0.74 (197)
NK 0.027 ± 0.006 0.816 ± 0.083 NA NA