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Table 2 Positively selected genes potentially related to programmed cell death

From: Comparative transcriptomics provide insight into the morphogenesis and evolution of fistular leaves in Allium

Orthologous group

Positively selected genes

Gene source

Function annotated

OG06438

MAC|c99454_g1, CHI|c73660_g1, ASC|c61655_g1, FIS|c70920_g1, CEP|c54051_g1, AGR|c38049_g1

Mitochondrial genome

Cytochrome c oxidase subunit 3

OG08411

MAC|c48312_g1, ASC|c92926_g1

Mitochondrial genome

cytochrome c biogenesis Fn

OG12823

ASC|c67719_g2, AGR|c41049_g1

Mitochondrial genome

cytochrome c oxidase subunit 2

OG13835

SAT|c125661_g1, POR|c94489_g1, MAC|c79087_g1

Mitochondrial genome

cytochrome c maturation protein CcmB

OG20657

CEP|c5005_g1, AGR|c29721_g1

Mitochondrial genome

cytochrome c biosynthesis ccmC-like protein

OG04672

SAT|c121207_g1, MAC|c150852_g1, ASC|c70366_g1, FIS|c65166_g1

Chloroplastic Genome

photosystem II protein D1

OG27563

ASC|c29090_g1

Chloroplastic Genome

photosystem II protein

OG15984

FIS|c46048_g1, CEP|c60376_g1

Nuclear Genome

Serine/threonine-protein kinase ATM-like protein

OG22529

CHI|c103126_g1

Nuclear Genome

serine/threonine-protein kinase ATR-like protein

OG28738

ASC|c79214_g1

Nuclear Genome

KDEL-tailed cysteine endopeptidase

OG09355

FIS|c74337_g2

Nuclear Genome

LOL2-like protein