From: Evolution of meiotic recombination genes in maize and teosinte
Gene | Alignment length (bp) | Diversity | Divergence | ||||||
---|---|---|---|---|---|---|---|---|---|
Nucleotide diversity in the coding region | Amino acid diversity (polymorphic amino acid residues per 100 residues) | d N/d S a | K scale factorb | ||||||
θ W | π (+/−SE) | π a | π s | π a /π s | |||||
Dmc1 | 1032 | 0.00436 | 0.00332 +/− 0.000104 | 0.00040 | 0.01269 | 0.032 | 0.87 | 0.013 | 1.74 |
Mlh1 | 1197 | 0.00310 | 0.00229 +/− 0.000078 | 0.00113 | 0.00600 | 0.188 | 1.66 | 0.157 | 0.43 |
Mre11A | 2124 | 0.00288 | 0.00229 +/− 0.000048 | 0.00036 | 0.00886 | 0.041 | 0.85 | 0.014 | 1.20 |
Mre11B | 2019 | 0.00224 | 0.00123 +/− 0.000056 | 0.00112 | 0.00162 | 0.691 | 2.23 | 0.370 | 1.00 |
Msh4 | 2412 | 0.00231 | 0.00321 +/− 0.000058 | 0.00088 | 0.01054 | 0.083 | 0.62 | 0.074 | 0.82 |
Mus81-1 | 1089 | 0.00244 | 0.00217 +/− 0.000062 | 0.00182 | 0.00361 | 0.504 | 2.00 | 0.129 | 0.76 |
Rad51A1 | 873 | 0.00212 | 0.00162 +/− 0.000084 | 0.00000 | 0.00832 | 0.000 | 0.00 | 0.000 | 2.18 |
Rad51A2 | 666 | 0.00398 | 0.00692 +/− 0.000084 | 0.00406 | 0.01595 | 0.255 | 1.18 | 0.122 | 2.22 |
Recq4 | 1878 | 0.00268 | 0.00273 +/− 0.000084 | 0.00144 | 0.00724 | 0.199 | 1.45 | 0.231 | 0.42 |
Spo11-1 | 948 | 0.00168 | 0.00097 +/− 0.000116 | 0.00043 | 0.00265 | 0.162 | 0.52 | 1.172 | 0.73 |
Spo11-2 | 984 | 0.00458 | 0.00444 +/− 0.000136 | 0.00232 | 0.01085 | 0.214 | 1.31 | 0.244 | -c |