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Table 1 Construction of the target database for Pfu and LM3 datasets

From: Using the entrapment sequence method as a standard to evaluate key steps of proteomics data analysis process

DataSets Sample sequences Entrapment sequences Sample tryptic peptides Entrapment tryptic peptides Shared tryptic peptide Shared/Sample tryptic peptides (%)
Pfu Pfu2045 Homo20187 145358 2338004 102 0.070
LM3 Homo20187 Arc208250 2338004 15344503 4864 0.208
LM3 Homo20187 Arc20825 2338004 1479773 1333 0.057