Staged heterogeneity learning to identify conformational B-cell epitopes from antigen sequences

BMC Genomics

Table 1 Prediction performance by staged heterogeneity learning in comparison with other prediction methods

Predictor	Dataset	Recall	Precision	F-score
SePre	Exp104	0.454	0.234	0.308
CBTOPE	Exp104	0.516	0.051	0.092
DiscoTope 2.0	Exp104	0.230	0.066	0.102
ElliPro	Exp104	0.705	0.066	0.121
SEPPA 2.0	Exp104	0.524	0.096	0.163
SePre	Exp163	0.314	0.159	0.211
CBTOPE	Exp163	0.492	0.052	0.094
DiscoTope 2.0	Exp163	0.231	0.051	0.083
ElliPro	Exp163	0.686	0.047	0.089
SEPPA 2.0	Exp163	0.429	0.063	0.110
SePre	Ren92unbound	0.639	0.426	0.511
CBTOPE	Ren92unbound	0.544	0.133	0.213
DiscoTope 2.0	Ren92unbound	0.279	0.162	0.205
ElliPro	Ren92unbound	0.702	0.120	0.205
SEPPA 2.0	Ren92unbound	0.484	0.164	0.245

ISSN: 1471-2164