Skip to main content

Table 2 Basic characteristics of each SNP for Crohn’s disease (CD)

From: An empirical fuzzy multifactor dimensionality reduction method for detecting gene-gene interactions

Index

rs number

MAF

Chromosome (gene)

p-value (rank)

Index

rs number

MAF

Chromosome (gene)

p-value (rank)

1

rs11805303

0.347

1 (IL23R)

4.41E-13 (2)

16

rs1456893

0.304

7

4.02E-05 (19)

2

rs12035082

0.410

1

2.70E-07 (8)

17

rs4263839

0.313

9 (NFSF15)

1.64E-05 (17)

3

rs10801047

0.079

1

1.09E-05 (15)

18

rs17582416

0.363

10 (OC105376492)

1.11E-03 (23)

4

rs11584383

0.297

1 (MROH3P)

4.62E-05 (20)

19

rs10995271

0.413

10

1.54E-05 (16)

5

rs3828309

0.453

2 (ATG16L1)

1.29E-13 (1)

20

rs10883365

0.498

10 (INC01475)

1.60E-06 (11)

6

rs9858542

0.299

3 (BSN)

3.20E-07 (9)

21

rs7927894

0.408

11

1.28E-02 (28)

7

rs17234657

0.146

5

1.71E-12 (3)

22

rs11175593

0.017

12 (OC105369735)

4.22E-02 (30)

8

rs9292777

0.367

5

1.04E-11 (4)

23

rs3764147

0.222

13 (LACC1)

3.34E-06 (13)

9

rs10077785

0.220

5 (C5orf56)

6.39E-05 (22)

24

rs17221417

0.310

16 (NOD2)

2.81E-10 (5)

10

rs13361189

0.084

5

7.04E-08 (6)

25

rs2872507

0.491

17

1.24E-03 (24)

11

rs4958847

0.130

5 (IRGM)

1.81E-06 (12)

26

rs744166

0.422

17 (STAT3)

6.27E-05 (21)

12

rs11747270

0.099

5 (IRGM)

3.13E-05 (18)

27

rs2542151

0.181

18

1.74E-07 (7)

13

rs6887695

0.329

5

4.69E-03 (27)

28

rs1736135

0.412

21 (LOC101927745)

3.39E-02 (29)

14

rs6908425

0.214

6 (CDKAL1)

1.02E-06 (10)

29

rs2836754

0.374

21 (LOC400867)

5.67E-06 (14)

15

rs7746082

0.293

6

4.20E-03 (26)

30

rs762421

0.408

21 (LOC105377139)

2.35E-03 (25)