Table 3 Comparison of four selection criteria on GSE40525
From: A clustering-based approach for efficient identification of microRNA combinatorial biomarkers
Feature combination | Performance measure | Selection criteria | |||
|---|---|---|---|---|---|
| Â | Â | FDA | T-test | SNR | Center |
Pair | AvgRank 10 | 9.1 | 9.1 | 39.1 | 57 |
| Â | AvgRank 100 | 103.6 | 103.0 | 335.6 | 402.6 |
| Â | AvgRank 1000 | 1469.8 | 1470.5 | 2085.6 | 2683.6 |
| Â | HitRatio 10(%) | 40.0 | 40.0 | 10.0 | 0 |
| Â | HitRatio 100(%) | 64.0 | 64.0 | 18.0 | 12.0 |
| Â | HitRatio 1000(%) | 39.0 | 39.2 | 24.4 | 15.8 |
Triple | AvgRank 10 | 26.3 | 26.3 | 262.8 | 360.2 |
| Â | AvgRank 100 | 229.4 | 229.4 | 1427.0 | 1737.2 |
| Â | AvgRank 1000 | 1573.9 | 1577.2 | 9085.5 | 11949.7 |
| Â | HitRatio 10(%) | 20.0 | 20.0 | 0 | 0 |
| Â | HitRatio 100(%) | 66.0 | 66.0 | 6.0 | 4.0 |
| Â | HitRatio 1000(%) | 37.0 | 36.8 | 4.6 | 2.8 |
Quadruple | AvgRank 10 | 174 | 174 | 229 | 191 |
| Â | AvgRank 100 | 273 | 273 | 2610.9 | 1906.5 |
| Â | AvgRank 1000 | 2836.0 | 2826.5 | 2926.7 | 2965.3 |
| Â | HitRatio 10(%) | 40.0 | 40.0 | 20.0 | 60.0 |
| Â | HitRatio 100(%) | 4.0 | 4.0 | 2.6 | 6.0 |
| Â | HitRatio 1000(%) | 19.3 | 19.0 | 2.6 | 4.8 |