Fig. 6
From: Improved annotation with de novo transcriptome assembly in four social amoeba species
Examples of updated annotation in each species. Panels a-d compare the existing gene model (black bars) to pile-up of aligned RNA-seq reads (brown), Trinity de novo transcripts (purple bars), PASAaa refinement (red bars), PASAua update (green bars). Intronic regions are shown by lines and UTRs by thinner green bars. The DNA strand is depicted by triangles at the end the bars: left end for reverse strand, right end for forward strand. Genes shown are: a DDB_G029582 (D. discoideum), b PPL_00079 (P. pallidum), c DFA_02662 (D. fasciculatum) and d DLA_11596/DLA_04629 (D. lacteum)