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Table 2 Intron retention (IR) and premature termination codons (PTCs) in V. dahliae genome

From: Transcriptome analysis reveals the complexity of alternative splicing regulation in the fungus Verticillium dahliae

Intron per gene

Intron-containing genes

PTCs

All

Non-specific IR

Specific IR

No IR

1

3228

732 (22.68%)

2496 (77.32%)

 

2

2396

216 (9.02%)

665 (27.75%)

1515 (63.23%)

201

3+

2800

60 (2.14%)

1282 (45.79%)

1458 (52.07%)

273

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BMC Genomics

ISSN: 1471-2164

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