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Table 1 Proteolytic genes specific to Atlantic-fed lice

From: Enhanced transcriptomic responses in the Pacific salmon louse Lepeophtheirus salmonis oncorhynchi to the non-native Atlantic Salmon Salmo salar suggests increased parasite fitness

Gene

Unique contigsa

Accession

CDD

Fold changeb

Carboxypeptidase B

5

P04069

cd03860

1.5, 4.1

Chymotrypsin A chain C

1

P00766

smart00020

4.4, 4.7

Chymotrypsin BI

1

Q00871

smart00020

2.7, 3.1

Coagulation factor IX

1

P16291

smart00020

1.7, 2.1

Collagenase

1

P08897

smart00020

1.8, 2.2

Cytosolic non-specific dipeptidase

3

Q96KP4

pfam01546

1.9, 2.1

Dipeptidyl peptidase 4

1

P14740

pfam00326

1.6, 2.8

Hypodermin-B

1

P35588

smart00020

2.2, 3.5

Legumain

1

Q4R4T8

pfam01650

1.8, 2.8

Neprilysin-2

2

O16796

pfam01431

3.0, 3.0

Ovochymase-1

1

Q7RTY7

smart00020

2.7, 5.9

Probable cysteine proteinase At3g43960

1

Q9LXW3

pfam00112

2.4, 2.6

Putative serine protease K12H4.7

2

P34528

pfam05577

1.9, 2.5

Trypsin-1

5

P00765

smart00020

1.6, 4.5

Trypsin-like serine protease

2

-

smart00020

1.8, 1.9

Zinc carboxypeptidase A 1

3

Q9VL86

cd03860

1.8, 2.3

  1. Proteases that were significantly upregulated in Atlantic-fed lice compared to either Coho- or Sockeye-fed lice are shown (FC ≥ 1.5)
  2. aGenes with similar annotation but from a different contig
  3. bCompared to Pacific salmon (Coho and Sockeye, respectively) at 48 hpi