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Table 5 Significant associations (p ≤ 0.05) identified between SNPs positions and studied traits

From: Impact of novel SNPs identified in Cynara cardunculus genes on functionality of proteins regulating phenylpropanoid pathway and their association with biological activities

Gene

SNP position

Aa residue change

Protein change influence

CGA content

Antioxidant activity

Antithrombin activity

HQT

C653T

S218F

From a polar to a hydrophobic residue. Serine phosphorylation site loss.

✓

✓

-

G964A

D322N

From a negative to a polar residue.

Influence the 319 and 323 phosphorylation sites and 333 ubiquitination site

 

✓

-

  1. (✓): Significant association (−): No association