Table 1 Number of differentially expressed genes in the pairwise comparisons of Dark+HKB vs. Light+HKB (left 2 columns) and Light+HKB vs. Light+depleted HKB (right 2 columns)
| Â | Dark+HKB vs. Light+HKB | Light+HKB vs. Light+depleted HKB | ||
|---|---|---|---|---|
Upregulated in Dark+HKB | Upregulated in Light+HKB | Upregulated in Light+HKB | Upregulated in Light+depleted HKB | |
Total number of differentially expressed genes | 471 | 906 | 5,540 | 5,152 |
Number of differentially expressed phototrophy-related genes | 1 | 16 | 7 | 7 |
Number of differentially expressed phagotrophy-related genes | 0 | 20 | 71 | 24 |
Number of differentially expressed genes coding for glycoside hydrolases and lysozymes | 0 | 16 | 32 | 14 |
Number of differentially expressed genes involved in major carbon metabolic pathways | 3 | 8 | 59 | 18 |
Number of differentially expressed genes involved in major nitrogen metabolic pathways | 5 | 0 | 7 | 12 |
Number of differentially expressed genes involved in tetrapyrrole synthesis | 0 | 15 | 18 | 12 |