Species | Contig N50 [141] | Scaffold N50 (Mb) | Scaffolds | % on chromosome | Sequencing platform | Total size (Mb) | References |
---|---|---|---|---|---|---|---|
Catfish | 77.2 | 7.73 | 9974 | 97.2 | Illumina, PacBio | 783 | Liu et al. 2016 [5] |
99.1 | Zeng et al. 2017 [13] | ||||||
Atlantic Salmon | 57.6 | 2.97 | 843,055 | 75.4 | Sanger, Illumina, PacBio | 2970 | Lien et al. 2016 [6] |
Tilapia | 29.3 | 2.80 | - | 70.9 | Illumina, PacBio | 928 | Brawand et al. 2014 [8] |
3090 | - | 86.9 | 1010 | Conte et al. 2016, PC | |||
Eastern oyster | 1.59 | 2.50 | 849 | In progress | PacBio, Illumina | 819 | Wes Warren, PC |
Rainbow trout | 7.7 | 0.38 | Â | 54.0 | Illumina | 1900 | Brawand et al. 2014 [8] Palti and Gao, PC |
13.9 | 1.72 | 82.0 | 2178 | ||||
Zebrafish | 25.0 | 1.55 | Â | 96.5 | Sanger, Illumina | 1410 | Howe et al. 2013 [157] |
California yellowtail | 139.3 | 1.49 | 4439 | - | Illumina | 685 | Andrew Severin, PC |
PacBio | |||||||
Pacific white shrimp (Litopenaeus vannamei) | 57.1 | 0.66 | 6007 | 71.6 | Illumina | 1779 | Jianhai Xiang, 2016, PC |
PacBio | |||||||
Pacific oyster | 19.4 | 0.4 | 11,969 | - | Illumina | 559 | Zhang et al. 2012b [9] |
Striped bass | 20.9 | 0.03 | 35,010 | - | Illumina | 585 | Benjamin Reading, 2016, PC |
PacBio | |||||||
White bass (male/female) | In process | In process | 56,818/57,533 | - | Illumina | 644/643 | Benjamin Reading, 2016, PC |
Pacific abalone | In process | In process | - | - | Illumina | 2000 | Severin, Purcell, Hyde, PC |
Yellow perch (male/female) | In process | In process | - | - | Illumina | 1380/1240 | Haping Wang, PC |