Development of intron targeting (IT) markers specific for chromosome arm 4VS of Haynaldia villosa by chromosome sorting and next-generation sequencing

Table 1 The representative 6 types IT markers corresponding to the sequence information in subgenome AA, BB, DD and VV

Marker no.	Scaffold of A subgenome of Chinese Spring	Scaffold of B subgenome of Chinese Spring	Scaffold of D subgenome of Chinese Spring	Scaffold of H.villosa
CINAU687	IWGSC_CSS_4AL_scaff_7174192	IWGSC_CSS_4BS_scaff_4898779	IWGSC_CSS_4DS_scaff_2293539	Hecate_CTG:136974268075349775
CINAU648	IWGSC_CSS_4AL_scaff_7100654	IWGSC_CSS_4BS_scaff_4885499	IWGSC_CSS_4DS_scaff_2219420	Hecate_SCF:1351
CINAU737	IWGSC_CSS_4AL_scaff_7040796	IWGSC_CSS_4BS_scaff_4869572	IWGSC_CSS_4DS_scaff_2316979	Hecate_SCF:732
CINAU665	IWGSC_CSS_4AL_scaff_7169654	IWGSC_CSS_4BS_scaff_4884845	IWGSC_CSS_4DS_scaff_2322521	Hecate_CTG:136972502843815791
CINAU735	IWGSC_CSS_4AL_scaff_7093114	IWGSC_CSS_4BS_scaff_4873209	IWGSC_CSS_4DS_scaff_2278641	Hecate_CTG:136974259485440371
CINAU646	IWGSC_CSS_4AL_scaff_7163083	IWGSC_CSS_4BS_scaff_4906319	IWGSC_CSS_4DS_scaff_2311585	Hecate_SCF:288

ISSN: 1471-2164