Fig. 1
From: Conserved expression of transposon-derived non-coding transcripts in primate stem cells
a Percent of all human TEs which are conserved in NHP grouped by TE class. C_G_R indicates TEs conserved in all 3 NHP species. b The proportion of instances in each TE family that are conserved in Chimpanzee (y-axis) relative to the average sequence identity score of the family (x-axis). Sequence similarity to the family’s consensus sequence is shown as a scaled Smith-Waterman (SW) score. This is used as a surrogate for the age of the TE family. Older TEs are on the left, and newer insertions are to the right. TE families which inserted more recently are less conserved than older TEs. TE families were filtered for those with more than 30 expressed instances in human. tRNA-Asn-ACC in red, AluYa5 in blue. c The same in Gorilla (d) The same in Rhesus