Skip to main content

Table 2 Conservation and TE contribution to human iPSC lncRNAs

From: Conserved expression of transposon-derived non-coding transcripts in primate stem cells

Lift human to _

LiftOver

LiftOver, TEs

Expressed in target species

LiftOver, Expressed, TEs

Chimpanzee

7479

5175 (69.19%)

2981 (39.86%)

2103 (28.12%)

Gorilla

6709

4707 (70.16%)

2086 (31.09%)

1465 (21.84%)

Rhesus

6208

4550 (73.29%)

1527 (24.60%)

1351 (21.77%)

  1. Column 2: The number of human lncRNAs which lift to each NHP (out of 9332 human lncRNAs). Column 3: The number of lifted lncRNAs which overlap TEs in the target species. Column 4: Lifted human lncRNAs that are expressed in the target species. Column 5: Lifted and expressed lncRNAs that overlap TEs