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Table 1 Over-represented GO terms common to 1306 and 88069 developmenta

From: RNA-seq of life stages of the oomycete Phytophthora infestans reveals dynamic changes in metabolic, signal transduction, and pathogenesis genes and a major role for calcium signaling in development

Stage GO Term Definition Typeb 1306 FDRc 88069 FDRc
Sporangia vs. hyphae GO:0005929 cilium CC 1.8E-41 3.3E-38
GO:0023052 signaling BP 2.2E-25 1.0E-16
GO:0005856 cytoskeleton CC 2.2E-24 5.7E-30
GO:0000902 cell morphogenesis BP 7.9E-19 3.0E-21
GO:0005886 plasma membrane CC 1.3E-18 6.3E-11
GO:0004674 protein serine/threonine kinase MF 2.1E-14 1.5E-09
GO:0005261 cation channel activity MF 6.1E-13 5.8E-11
GO:0003774 motor activity MF 1.1E-09 9.5E-09
GO:0005524 ATP binding MF 1.9E-08 1.0E-07
GO:0009187 cyclic nucleotide metabolic process BP 1.7E-07 2.7E-04
GO:0005509 calcium ion binding MF 4.2E-06 2.7E-04
GO:0004872 receptor activity MF 1.3E-04 7.3E-05
GO:0008092 cytoskeletal protein binding MF 6.6E-03 1.4E-04
Zoospore vs. sporangia GO:0044426 cell wall part CC 1.7E-10 9.3E-07
GO:0004674 protein serine/threonine kinase MF 6.6E-10 7.2E-09
GO:0016837 carbon-oxygen lyase, polysaccharide MF 2.8E-06 2.8E-06
GO:0030570 pectate lyase activity MF 1.8E-05 1.8E-05
GO:0050525 cutinase activity MF 1.8E-05 4.9E-04
GO:0004748 ribonucleoside-diphosphate reductase MF 1.3E-03 1.3E-03
GO:0016835 carbon-oxygen lyase activity MF 4.7E-03 4.7E-03
Germinating cysts vs. sporangia GO:0000502 proteasome complex CC 5.9E-11
GO:0004553 glycosyl hydrolase activity MF 3.8E-08
GO:1901575 organic substance catabolic process BP 3.1E-06
GO:0016054 organic acid catabolic process BP 6.0E-06
GO:1902221 PEP family amino acid metabolism BP 2.9E-05
GO:0005975 carbohydrate metabolic process BP 3.5E-05
GO:1901565 organonitrogen compound catabolism BP 3.7E-05
GO:0005576 extracellular region CC 1.1E-04
GO:0031988 membrane-bounded vesicle CC 6.3E-04
GO:0005759 mitochondrial matrix CC 1.1E-03
GO:0003868 4-hydroxyphenylpyruvate dioxygenase MF 2.6E-03
GO:0045454 cell redox homeostasis BP 3.1E-03
GO:0016885 ligase, forming carbon-carbon bonds MF 4.9E-03
GO:0016052 carbohydrate catabolic process BP 5.9E-03
GO:0004650 polygalacturonase activity MF 6.0E-03
GO:0004298 threonine-type endopeptidase MF 7.6E-03
  1. a After removing redundant terms and merging groups having >75% of genes in common
  2. b BP, biological process; MF, molecular function; CC, cellular component
  3. c False discovery rate, corrected for multiple testing by Benjamini-Hochberg method