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Table 1 Preliminary analysis of solexa high-throughput sequencing data

From: Effects of exposure to Streptococcus iniae on microRNA expression in the head kidney of genetically improved farmed tilapia (Oreochromis niloticus)

  CO library IN library
Raw reads 12,423,338 12,845,540
Clean reads 12,089,630 12,624,975
Total small RNA(18–30 nt) 541,895 640,740
Mapping to genome 264,661 312,600
Known miRNA 1736 1729
Novel miRNA 164 165