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Table 4 Summary statistics of the Peach v2.0 chromosome-scale assembly statistics and its comparison with the v1.0

From: The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity

 

Peach v2.0

Peach v1.0

Number of scaffolds

191

202

Number of contigs

2,525

2,730

Scaffold sequence

227.4 Mb

227.3 Mb

Mapped scaffold sequence

225.7 Mb (99.2%)

218.4 Mb (96%)

Oriented scaffold seqeuence

223.3 Mb (98.2%)

194.6 Mb (85.6%)

Contig sequence

224.6 Mb

224.6 Mb

Scaffold N/L50

4/27.4 Mb

4/26.8 Mb

Contig N/L50

250/255.4 kb

294/214.2 kb

Number of scaffolds > 50 KB

11

21

% main genome in scaffolds > 50 kb

99.4%

99.4%