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Table 3 Summary of genome-wide significant association signals for fatty acid composition in B. napus

From: Genome-wide association mapping and Identification of candidate genes for fatty acid composition in Brassica napus L. using SNP markers

Trait Environment Chr. Interval (Mb) No. of SNPs -log (P-value) R 2 (%)
Palmitic acid 2014Cq A2 0.37 2 4.61–5.09 4.58–5.71
2014Cq A5   1 4.37 4.93
2014Cq A6   1 4.50 5.07
2013Cq A8 3.68 26 4.18–11.92 4.43–11.53
2014Cq 10 4.15–8.52 4.71–9.41
2013Cq A9   1 4.43 4.68
2013Cq A10   1 4.26 4.52
2014Cq C1   1 4.41 4.98
2013Cq C3 7.47 7 4.30–10.44 4.55–10.78
2014Cq 5 4.22–6.86 4.78–6.90
2014Cq C9   1 5.56 6.21
Stearic acid 2014Cq A1   1 4.18 4.35
2013Cq A5   1 4.71 4.54
2013Cq A8 4.38 2 4.60–4.90 3.91–4.77
2014Cq 2 4.93–5.47 5.73–5.86
2013Cq A10 3.96 2 4.10–4.40 3.98–4.25
2014Cq   1 4.55 5.38
2014Cq C3 0.09 2 5.44–5.61 6.38–6.58
2013Cq C4 0.02 2 4.14–4.51 4.02–4.56
2014Cq C5   1 4.39 4.57
Oleic acid 2013Cq A6 12.64 1 5.56 3.32
2014Cq 2 4.41–4.54 2.85–3.15
2013Cq A8 5.94 33 4.40–23.48 2.66–14.48
2014Cq 28 4.33–14.87 3.09–10.46
2013Cq A9 1.57 7 4.73–7.79 2.85–4.62
2014Cq 5 4.11–6.75 2.94–4.73
2013Cq C1 6.5 48 4.05–5.81 2.47–3.47
2014Cq 52 4.06–6.08 2.91–4.27
2013Cq C2 17.62 8 4.18–5.31 2.54–3.19
2013Cq C3 7.40 35 4.15–24.03 2.52–14.23
2014Cq 32 4.07–16.79 2.92–11.26
2013Cq C4   1 5.33 2.85
2014Cq 1 6.63 4.20
2013Cq C8 22.18 2 4.29–6.73 2.60–4.00
2014Cq 2 4.50–7.25 3.21–5.07
2013Cq C9 34.81 1 4.35 2.31
2014Cq 2 4.42–4.72 2.96–3.15
Linoleic acid 2013Cq A2 4.60 4 4.66–6.15 5.38–7.01
2014Cq    1 4.07 4.53
2013Cq A3   1 4.21 4.89
2013Cq A6 0.47 2 4.11–6.21 4.78–7.07
2014Cq 1 4.29 4.77
2013Cq A8 9.49 36 4.05–12.11 4.72–13.74
2014Cq 14 4.41–9.77 4.89–10.58
2013Cq A9   1 4.09 4.16
2014Cq    1 4.14 4.61
2013Cq C2 15.39 2 4.91–4.95 5.65–5.70
2014Cq    2 4.10–4.20 4.56–4.67
2013Cq C3 0.73 4 5.49–10.20 6.29–11.54
2014Cq    3 6.10–8.86 6.00–8.83
2013Cq C5   1 4.39 5.09
2013Cq C7   1 4.67 5.39
2013Cq C8   1 4.93 5.67
2014Cq    1 4.22 4.69
Linolenic acid 2014Cq A1   1 4.18 5.36
2013Cq A2 14.46 13 4.41–8.16 5.27–9.54
2014Cq 13 4.20–7.54 5.39–9.45
2013Cq A5   1 4.78 5.69
2014Cq A6   1 4.54 5.80
2013Cq A8   1 5.16 6.12
2013Cq A9   1 6.02 7.10
2014Cq    1 5.23 6.64
2013Cq C2 21.61 3 4.87–8.13 5.79–9.51
2014Cq    3 4.23–5.59 5.42–7.07
2013Cq C4   1 5.72 6.75
2014Cq    1 5.02 6.38
2014Cq C8   1 4.11 3.79
Eicosenoic acid 2013Cq A1 11.82 2 4.19–4.83 3.90–4.46
2013Cq A4 0.63 2 4.09–4.30 3.82–3.99
2014Cq 2 4.40–4.61 4.39–4.58
2013Cq A6   1 5.31 4.88
2013Cq A7   1 4.80 4.43
2013Cq A8 8.79 29 5.24–16.86 4.82–15.52
2014Cq 29 4.12–11.73 4.12–11.44
2013Cq A9 1.70 9 5.18–9.52 4.76–8.63
2014Cq 5 4.21–5.73 4.20–5.64
2013Cq C1 6.49 22 4.12–6.92 3.84–6.30
2014Cq    7 4.15–5.22 4.15–5.16
2013Cq C3 22.87 19 4.05–18.31 3.78–16.10
2014Cq    12 4.27–14.09 4.27–13.01
2013Cq C4 24.92 8 4.06–5.73 3.78–5.25
2014Cq    5 4.34–4.47 3.91–4.42
2013Cq C7 20.84 1 5.85 4.80
2014Cq    2 4.20–4.31 4.20–4.30
2013Cq C8   1 6.34 5.78
2014Cq    1 5.46 5.38
2013Cq C9 44.36 5 4.20–6.47 3.35–5.90
2014Cq    1 5.01 4.96
Erucic acid 2013Cq A8 5.93 10 4.06–6.53 6.28–10.97
2014Cq    22 4.93–17.20 3.78–13.29
2014Cq A9   1 5.57 4.25
2014Cq A10   1 5.21 3.98
2013Cq C3 5.21 12 4.42–10.83 2.79–8.74
2014Cq    13 4.12–17.03 2.79–12.46
2014Cq C8   1 5.21 3.98
2014Cq C9 2.18 2 4.86–4.89 3.32–3.73