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Table 1 Sequencing and summary statistics for Achimenes reference floral transcriptome assemblies and annotation

From: Comparative transcriptome analyses of flower development in four species of Achimenes (Gesneriaceae)

 

A. cettoana

A. erecta

A. misera

A. patens

A. Sequencing

 Total reads

67,428,998

63,582,836

69,588,964

71,960,488

 Bud

21,112,016

18,680,312

24,016,214

22,585,994

 Stage D

22,382,106

24,084,300

19,391,388

28,579,042

 Pre-Anthesis

23,934,876

20,818,224

26,181,362

20,795,452

 Total length (bp)

6,742,899,800

6,358,283,600

6,958,896,400

7,196,048,800

B. Final merged assembly

 Primary transcripts

29,065

41,381

41,285

37,898

 Alternate transcripts

23,332

94,172

105,442

65,115

 N50

2,113

2,061

1,990

2,109

 Mean length (bp)

1,417

1,268

1,260

1,304

 Total bases, Primary set

41,202,771

52,511,722

52,038,201

49,447,956