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Table 3 Gene ontology terms overrepresented in the “Shared Achimenes” orthogroups

From: Comparative transcriptome analyses of flower development in four species of Achimenes (Gesneriaceae)

Term Description Type FDR Single-test p-value Number in test group Number in reference group
GO:0003676 Nucleic acid binding MF 4.20e-46 2.30e-48 977 7373
GO:0003677 DNA binding MF 2.10e-44 2.30e-46 612 3951
GO:0003682 Chromatin binding MF 3.10e-28 6.80e-30 157 619
GO:0044877 Macromolecular complex binding MF 3.10e-28 6.80e-30 157 619
GO:0003700 Transcription factor activity, sequence-specific DNA binding MF 6.30e-20 2.00e-21 200 1112
GO:0001071 Nucleic acid binding transcription factor activity MF 6.30e-20 2.00e-21 200 1112
GO:1901363 Heterocyclic compound binding MF 2.70e-08 1.20e-09 1517 16173
GO:0097159 Organic cyclic compound binding MF 2.70e-08 1.20e-09 1517 16173
GO:0005618 Cell wall CC 3.10e-06 1.50e-07 43 199
GO:0030312 External encapsulating structure CC 4.50e-06 2.40e-07 43 203
GO:0005488 Binding MF 1.30e-04 8.00e-06 2737 31646
GO:0090304 Nucleic acid metabolic process BP 2.70e-04 1.90e-05 145 1210
GO:0006259 DNA metabolic process BP 2.70e-04 1.90e-05 145 1210
GO:0030246 Carbohydrate binding MF 2.10e-03 1.60e-04 63 456
GO:0019825 Oxygen binding MF 5.60e-03 4.60e-04 5 5
GO:0071944 Cell periphery CC 5.60e-03 4.90e-04 58 430
GO:0009653 Anatomical structure morphogenesis BP 7.00e-03 6.50e-04 7 14
GO:0015979 Photosynthesis BP 9.40e-03 9.20e-04 35 229
GO:0006725 Cellular aromatic compound metabolic process BP 1.90e-02 2.30e-03 590 6399
GO:1901360 Organic cyclic compound metabolic process BP 1.90e-02 2.30e-03 590 6399
GO:0046483 Heterocycle metabolic process BP 1.90e-02 2.30e-03 590 6399
GO:0006139 Nucleobase-containing compound metabolic process BP 1.90e-02 2.30e-03 590 6399
GO:0005576 Extracellular region CC 2.10e-02 2.60e-03 31 209
GO:0005634 Nucleus CC 2.80e-02 3.70e-03 236 2391
GO:0009607 Response to biotic stimulus BP 3.80e-02 5.20e-03 19 113
GO:0005615 Extracellular space CC 4.20e-02 6.20e-03 6 17
GO:0044421 Extracellular region part CC 4.20e-02 6.20e-03 6 17
  1. Abbreviations: BP biological process, CC cellular component, FDR false discovery rate corrected p-value, MF molecular function