TY - STD TI - Chadeau-Hyam M, Vermeulen RCH, Hebels DGAJ, Castagné R, Campanella G, Portengen L, et al. Pre-diagnostic Transcriptomic Markers of Chronic Lymphocytic Leukemia Reveal Perturbations 10 years before diagnosis. Ann Oncol. 2014;25(5):1065-72. ID - ref1 ER - TY - JOUR AU - Vineis, P. AU - Perera, F. PY - 2007 DA - 2007// TI - Molecular epidemiology and biomarkers in etiologic cancer research: the new in light of the old JO - Cancer Epidemiol Biomarkers Prev VL - 16 UR - https://doi.org/10.1158/1055-9965.EPI-07-0457 DO - 10.1158/1055-9965.EPI-07-0457 ID - Vineis2007 ER - TY - JOUR AU - Androulakis, I. P. AU - Yang, E. AU - Almon, R. R. PY - 2007 DA - 2007// TI - Analysis of time-series gene expression data: methods, challenges, and opportunities JO - Annu Rev Biomed Eng VL - 9 UR - https://doi.org/10.1146/annurev.bioeng.9.060906.151904 DO - 10.1146/annurev.bioeng.9.060906.151904 ID - Androulakis2007 ER - TY - JOUR AU - Barrett, T. AU - Wilhite, S. E. AU - Ledoux, P. AU - Evangelista, C. AU - Kim, I. F. AU - Tomashevsky, M. PY - 2013 DA - 2013// TI - NCBI GEO: archive for functional genomics data sets--update JO - Nucleic Acids Res VL - 41 UR - https://doi.org/10.1093/nar/gks1193 DO - 10.1093/nar/gks1193 ID - Barrett2013 ER - TY - JOUR AU - Rustici, G. AU - Kolesnikov, N. AU - Brandizi, M. AU - Burdett, T. AU - Dylag, M. AU - Emam, I. PY - 2013 DA - 2013// TI - ArrayExpress update--trends in database growth and links to data analysis tools JO - Nucleic Acids Res VL - 41 UR - https://doi.org/10.1093/nar/gks1174 DO - 10.1093/nar/gks1174 ID - Rustici2013 ER - TY - JOUR AU - Rung, J. AU - Brazma, A. PY - 2013 DA - 2013// TI - Reuse of public genome-wide gene expression data JO - Nat Rev Genet VL - 14 UR - https://doi.org/10.1038/nrg3394 DO - 10.1038/nrg3394 ID - Rung2013 ER - TY - JOUR AU - Gutiérrez, N. C. AU - Ocio, E. M. AU - de Las Rivas, J. AU - Maiso, P. AU - Delgado, M. AU - Fermiñán, E. PY - 2007 DA - 2007// TI - Gene expression profiling of B lymphocytes and plasma cells from Waldenström’s macroglobulinemia: comparison with expression patterns of the same cell counterparts from chronic lymphocytic leukemia, multiple myeloma and normal individuals JO - Leukemia VL - 21 UR - https://doi.org/10.1038/sj.leu.2404520 DO - 10.1038/sj.leu.2404520 ID - Gutiérrez2007 ER - TY - JOUR AU - Görgün, G. AU - Holderried, T. A. W. AU - Zahrieh, D. AU - Neuberg, D. AU - Gribben, J. G. PY - 2005 DA - 2005// TI - Chronic lymphocytic leukemia cells induce changes in gene expression of CD4 and CD8 T cells JO - J Clin Invest VL - 115 UR - https://doi.org/10.1172/JCI24176 DO - 10.1172/JCI24176 ID - Görgün2005 ER - TY - JOUR AU - Haferlach, T. AU - Kohlmann, A. AU - Wieczorek, L. AU - Basso, G. AU - Kronnie, G. T. AU - Béné, M. -. C. PY - 2010 DA - 2010// TI - Clinical utility of microarray-based gene expression profiling in the diagnosis and subclassification of leukemia: report from the international microarray innovations in leukemia study group JO - J Clin Oncol VL - 28 UR - https://doi.org/10.1200/JCO.2009.23.4732 DO - 10.1200/JCO.2009.23.4732 ID - Haferlach2010 ER - TY - JOUR AU - Sharma, S. AU - Lichtenstein, A. PY - 2009 DA - 2009// TI - Aberrant splicing of the E-cadherin transcript is a novel mechanism of gene silencing in chronic lymphocytic leukemia cells JO - Blood VL - 114 UR - https://doi.org/10.1182/blood-2009-03-206482 DO - 10.1182/blood-2009-03-206482 ID - Sharma2009 ER - TY - JOUR AU - Göthert, J. R. AU - Eisele, L. AU - Klein-Hitpass, L. AU - Weber, S. AU - Zesewitz, M. -. L. AU - Sellmann, L. PY - 2013 DA - 2013// TI - Expanded CD8+ T cells of murine and human CLL are driven into a senescent KLRG1+ effector memory phenotype JO - Cancer Immunol Immunother VL - 62 UR - https://doi.org/10.1007/s00262-013-1473-z DO - 10.1007/s00262-013-1473-z ID - Göthert2013 ER - TY - JOUR AU - Vargova, K. AU - Curik, N. AU - Burda, P. AU - Basova, P. AU - Kulvait, V. AU - Pospisil, V. PY - 2011 DA - 2011// TI - MYB transcriptionally regulates the miR-155 host gene in chronic lymphocytic leukemia JO - Blood VL - 117 UR - https://doi.org/10.1182/blood-2010-05-285064 DO - 10.1182/blood-2010-05-285064 ID - Vargova2011 ER - TY - JOUR AU - Gómez-Abad, C. AU - Pisonero, H. AU - Blanco-Aparicio, C. AU - Roncador, G. AU - González-Menchén, A. AU - Martinez-Climent, J. A. PY - 2011 DA - 2011// TI - PIM2 inhibition as a rational therapeutic approach in B-cell lymphoma JO - Blood VL - 118 UR - https://doi.org/10.1182/blood-2011-03-344374 DO - 10.1182/blood-2011-03-344374 ID - Gómez-Abad2011 ER - TY - JOUR AU - Davis, S. AU - Meltzer, P. S. PY - 2007 DA - 2007// TI - GEOquery: a bridge between the gene expression omnibus (GEO) and BioConductor JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm254 DO - 10.1093/bioinformatics/btm254 ID - Davis2007 ER - TY - STD TI - Ihnatova I. MAMA: an R package for Meta-Analysis of MicroArray. 2013. R package version: 2.2.1. ID - ref15 ER - TY - JOUR AU - Choi, J. K. AU - Yu, U. AU - Kim, S. AU - Yoo, O. J. PY - 2003 DA - 2003// TI - Combining multiple microarray studies and modeling interstudy variation JO - Bioinformatics VL - 19 UR - https://doi.org/10.1093/bioinformatics/btg1010 DO - 10.1093/bioinformatics/btg1010 ID - Choi2003 ER - TY - JOUR AU - Hallmans, G. AU - Agren, A. AU - Johansson, G. AU - Johansson, A. AU - Stegmayr, B. AU - Jansson, J. -. H. PY - 2003 DA - 2003// TI - Cardiovascular disease and diabetes in the northern sweden health and disease study cohort - evaluation of risk factors and their interactions JO - Scand J Public Health Suppl VL - 61 UR - https://doi.org/10.1080/14034950310001432 DO - 10.1080/14034950310001432 ID - Hallmans2003 ER - TY - STD TI - Palli D, Berrino F, Vineis P, Tumino R, Panico S, Masala G, et al. A molecular epidemiology project on diet and cancer: the EPIC-Italy Prospective Study. Design and baseline characteristics of participants. Tumori. 2003;89:586–93. ID - ref18 ER - TY - JOUR AU - Hebels, D. G. A. J. AU - Georgiadis, P. AU - Keun, H. C. AU - Athersuch, T. J. AU - Vineis, P. AU - Vermeulen, R. PY - 2013 DA - 2013// TI - Performance in omics analyses of blood samples in long-term storage: opportunities for the exploitation of existing biobanks in environmental health research JO - Environ Health Perspect VL - 121 ID - Hebels2013 ER - TY - STD TI - Tenenbaum D. KEGGREST: Client-side REST access to KEGG. R package version 1.6.1. ID - ref20 ER - TY - JOUR AU - Landau, D. A. AU - Tausch, E. AU - Taylor-Weiner, A. N. AU - Stewart, C. AU - Reiter, J. G. AU - Bahlo, J. PY - 2015 DA - 2015// TI - Mutations driving CLL and their evolution in progression and relapse JO - Nature VL - 526 UR - https://doi.org/10.1038/nature15395 DO - 10.1038/nature15395 ID - Landau2015 ER - TY - JOUR AU - Morabito, F. AU - Mosca, L. AU - Cutrona, G. AU - Agnelli, L. AU - Tuana, G. AU - Ferracin, M. PY - 2013 DA - 2013// TI - Clinical monoclonal B lymphocytosis versus Rai 0 chronic lymphocytic leukemia: A comparison of cellular, cytogenetic, molecular, and clinical features JO - Clin Cancer Res VL - 19 UR - https://doi.org/10.1158/1078-0432.CCR-13-0622 DO - 10.1158/1078-0432.CCR-13-0622 ID - Morabito2013 ER - TY - JOUR AU - Goldin, L. R. AU - McMaster, M. L. AU - Caporaso, N. E. PY - 2013 DA - 2013// TI - Precursors to lymphoproliferative malignancies JO - Cancer Epidemiol Biomarkers Prev VL - 22 UR - https://doi.org/10.1158/1055-9965.EPI-12-1348 DO - 10.1158/1055-9965.EPI-12-1348 ID - Goldin2013 ER - TY - JOUR AU - Kuehl, W. M. AU - Bergsagel, P. L. PY - 2012 DA - 2012// TI - Molecular pathogenesis of multiple myeloma and its premalignant precursor JO - J Clin Invest VL - 122 UR - https://doi.org/10.1172/JCI61188 DO - 10.1172/JCI61188 ID - Kuehl2012 ER -