Genome-wide expression profiling in leaves and roots of date palm (Phoenix dactylifera L.) exposed to salinity

BMC Genomics

Table 1 Transcriptomic sequences obtained from the analysis of total RNA isolated from NaCl treated and untreated leaf and root tissues

Sample	Number of reads	Total (bp)	Total Length of contigs	Total number of contigs	Maximum length (bp)	Minimum length (bp)	Differentially expressed (≥2 fold change, p-value, FDR < 0.05)
Control-leaf	89,382,824	9,027,665,224	31,717,837	43,243	12,301	201	Up-regulated	1270
Treated-leaf	143,071,624	14,450,234,024	31,717,837	43,243	12,301	201	Down-regulated	1360
Control-root	114,677,846	11,582,462,446	67,808,169	85,526	7671	201	Up-regulated	2297
Treated-root	95,910,068	9,686,916,868	67,808,169	85,526	7671	201	Down-regulated	2387
Total	443,042,362	44,747,278,562	99,526,006	128,769				7314

ISSN: 1471-2164