Fig. 3From: Positional bias in variant calls against draft reference assembliesDistribution of SNP positions at the 5′ end of contigs in the Bs-1 data set with repetitive element annotation. Colour indicates whether the SNPs are within repetitive sequences (blue) or not (orange). SNPs were called from the Bs-1 read alignments. Repetitive elements included all sequences reported by RepeatMaskerBack to article page