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Table 4 Genes in significant GO terms within LD block on LG02

From: Highly localized divergence within supergenes in Atlantic cod (Gadus morhua) within the Gulf of Maine

Gene Starting base Gene description
GAMO_00059458 18475327 zgc:112234: Histone H2B 1/2 (Danio rerio)
GAMO_00059459 18476591 Histone H2A (Oncorhynchus mykiss)
GAMO_00059461 18489582 TGas006m08.1: Histone H4 (Xenopus tropicalis)
GAMO_00059462 18491420 Histone H2A (Oncorhynchus mykiss)
GAMO_00059465 18506398 Histone H2A (Oncorhynchus mykiss)
GAMO_00059556 19188916 STRA13: Centromere protein X (Homo sapiens)
GAMO_00059593 19396062 Crebbp: CREB-binding protein (Rattus norvegicus)
GAMO_00059696 20010135 NMT1: Glycylpeptide N-tetradecanoyltransferase 1 (Homo sapiens)
GAMO_00059920 21260662 Coro1b: Coronin-1B (Mus musculus)
GAMO_00059924 21287842 suv420h2: Histone-lysine N-methyltransferase SUV420H2 (Xenopus laevis)
GAMO_00059998 21707418 KCNA1: Potassium voltage-gated channel subfamily A member 1 (Homo sapiens)
GAMO_00060305 23130440 tmem11: Transmembrane protein 11%2C mitochondrial (Danio rerio)
GAMO_00060314 23170545 Histone H2A (Oncorhynchus mykiss)
GAMO_00060318 23177224 Histone H2A (Oncorhynchus mykiss)
GAMO_00060319 23198635 Histone H3 (Urechis caupo)
GAMO_00060320 23199855 Histone H2A (Oncorhynchus mykiss)
GAMO_00060321 23201514 TGas006m08.1: Histone H4 (Xenopus tropicalis)
GAMO_00060322 23202645 Histone H3 (Urechis caupo)
GAMO_00060324 23204017 Histone H2B (Salmo trutta)
GAMO_00060364 23359510 Pigq: Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q (Mus musculus)
GAMO_00060373 23393752 Histone H2A (Oncorhynchus mykiss)
GAMO_00060375 23400842 TGas006m08.1: Histone H4 (Xenopus tropicalis)
GAMO_00060376 23401993 Histone H3 (Urechis caupo)
GAMO_00060390 23480761 HDAC9: Histone deacetylase 9 (Homo sapiens)
GAMO_00060462 23855114 APOL3: Apolipoprotein L3 (Homo sapiens)
GAMO_00060465 23866729 APOL3: Apolipoprotein L3 (Homo sapiens)
GAMO_00060467 23891523 APOL3: Apolipoprotein L3 (Homo sapiens)
  1. While several GO terms were significantly enriched, many of them collapsed to the same set of DNA structural genes, including several genes encoding all four major histone proteins that make up the nucleosome