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Table 5 GO enrichment analysis of linkage disequilibrium block on LG07

From: Highly localized divergence within supergenes in Atlantic cod (Gadus morhua) within the Gulf of Maine

GO.ID Term Annotated Significant Fisher pval p-adj (fdr)
GO:0006855 drug transmembrane transport 5 2 0.0014 1
GO:0006066 alcohol metabolic process 24 3 0.0028 1
GO:0015893 drug transport 8 2 0.0038 1
GO:0042493 response to drug 8 2 0.0038 1
GO:0044765 single-organism transport 1098 23 0.0044 1
GO:0023051 regulation of signalling 275 9 0.0054 1
GO:1902578 single-organism localization 1118 23 0.0055 1
GO:1901615 organic hydroxy compound metabolic process 31 3 0.0058 1
GO:0006071 glycerol metabolic process 10 2 0.0059 1
GO:0019400 alditol metabolic process 10 2 0.0059 1
  1. Using topGO, (in R), enrichment analysis shows multiple GO categories that may be enriched in the LD block from LG07, including genes involved with signal transport and metabolic processes. Total number of annotated genes in each GO category is shown, as well as those within the LD block that are significant (Fisher test p < 0.01). Multiple-test correction (calculated as false-discovery rate, ‘fdr’) is shown in p-adj column