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Table 6 GO enrichment analysis of linkage disequilibrium block on LG12

From: Highly localized divergence within supergenes in Atlantic cod (Gadus morhua) within the Gulf of Maine

GO.ID

Term

Annotated

Significant

Fisher pval

p-adj (fdr)

GO:0051648

vesicle localization

4

2

0.002

1

GO:0051650

establishment of vesicle localization

4

2

0.002

1

GO:0009057

macromolecule catabolic process

144

8

0.0051

1

GO:0051656

establishment of organelle localization

7

2

0.0067

1

GO:0051640

organelle localization

8

2

0.0088

1

  1. Using topGO, (in R), enrichment analysis shows multiple GO categories that may be enriched in the LD block from LG12. Total number of annotated genes in each GO category is shown, as well as those within the LD block that are significant (Fisher test p < 0.01). Multiple-test correction (calculated as false-discovery rate ‘fdr’) is shown in p-adj column