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Table 7 Comparison of genome contents and population divergence of cod chromosome linkage groups 2, 7 and 12

From: Highly localized divergence within supergenes in Atlantic cod (Gadus morhua) within the Gulf of Maine

Group # SNPs Block length (Mb) SNP linked # genes Genes in LD SNP density proportion exonic SNPs Fst in LD block FST vs LD FST outside LD block Notes
LG02 43,341 5.6 33 1095 294 7.72E-03 0.089 0.098 negative 0.0025 discontinuous block
LG07 77,751 9.3 54 1166 306 8.36E-03 0.064 0.089 positive 0.0004  
LG12 61,251 11.6 17 975 437 5.29E-03 0.071 0.173 higly positive 0.0022 marked lack of SNPs adjacent to linkage block
Not 2, 7, or 12 2,792,388 493.2