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Table 1 The pancRNA-partnered genes in the five species

From: Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals

Species Total protein-coding genesa Positive correlationb (pancRNA-partnered genes) (%)c Negative correlationd (%)e
Chimp 15036 2013 13.4% 157 1.0%
Macaque 11745 1293 11.0% 83 0.7%
Marmoset 15125 1588 10.5% 74 0.5%
Mouse 17193 3229 18.8% 102 0.6%
Rat 18715 1835 9.8% 75 0.4%
  1. aTotal protein-coding genes excluding genes containing parts of other genes within their promoters
  2. bThe protein-coding genes whose expression level is positively correlated with those of the corresponding pancRNA (P < 0.05)
  3. cThe percentage of the protein-coding genes whose expression level is positively correlated with those of the corresponding pancRNA in total protein-coding genes
  4. dThe protein-coding genes whose expression level is negatively correlated with those of the corresponding pancRNA (P < 0.05)
  5. eThe percentage of the protein-coding genes whose expression level is negatively correlated with those of the corresponding pancRNA in total protein-coding genes
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BMC Genomics

ISSN: 1471-2164

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