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Table 2 Transcripts showing a significant differential ecotypic response to water deficit treatment

From: Medium term water deficit elicits distinct transcriptome responses in Eucalyptus species of contrasting environmental origin

FDR value

E. grandis annotation (Eucgr_ID)

Putative gene function (TAIR definition)

Arabidopsis annotation (TAIR ID)

E. cladocalyx genes showing significantly higher expression in water deficit (SS) treatment

 2E-06

Eucgr.I02543

#N/A

#N/A

 2E-06

Eucgr.E03884

NULL

AT3G09950.1

 6E-06

Eucgr.J00089

#N/A

#N/A

 2E-05

Eucgr.E00360

Expansin-like B1

AT4G17030.1

 3E-05

Eucgr.I00610

Regulator of Vps4 activity in the MVB pathway protein

AT4G35730.1

 9E-05

Eucgr.I02395

Dehydrin family protein

AT5G66400.1

 1E-04

Eucgr.H02812

F-box family protein

AT3G06240.1

 3E-04

Eucgr.F00644

NULL

NULL

 5E-04

Eucgr.E00358

Expansin-like B1

AT4G17030.1

 6E-04

Eucgr.E01430

NAD(P)-binding Rossmann-fold superfamily protein

AT2G45400.1

 9E-04

Eucgr.C00678

17.6 kDa class II heat shock protein

AT5G12020.1

 1E-03

Eucgr.D01888

Osmotin 34

AT4G11650.1

 1E-03

Eucgr.A02790

CAP160 protein

AT5G52300.1

 1E-03

Eucgr.H00118

AWPM-19-like family protein

AT1G04560.1

 2E-03

Eucgr.F00639

NULL

NULL

 3E-03

Eucgr.C03896

Beta-galactosidase 12

AT4G26140.1

 3E-03

Eucgr.A02982

NULL

NULL

 3E-03

Eucgr.H02021

NULL

NULL

 3E-03

Eucgr.C04087

NULL

NULL

 4E-03

Eucgr.B00093

HVA22 homologue D

AT4G24960.1

 4E-03

Eucgr.B02479

Isovaleryl-CoA-dehydrogenase

AT3G45300.1

 5E-03

Eucgr.K02416

NULL

AT1G03910.1

 5E-03

Eucgr.F01551

Cytochrome P450, family 721, subfamily A, polypeptide 1

AT1G75130.1

 5E-03

Eucgr.B01256

NB-ARC domain-containing disease resistance protein

AT3G14470.1

 5E-03

Eucgr.D01823

1 beta-hydroxylase 1

AT4G25700.1

 6E-03

Eucgr.A02983

NULL

NULL

 6E-03

Eucgr.K02932

Heavy metal transport/detoxification superfamily protein

AT5G03380.1

 6E-03

Eucgr.E03924

Tonoplast dicarboxylate transporter

AT5G47560.1

 8E-03

Eucgr.F00839

D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein

AT4G27190.1

 9E-03

Eucgr.B02321

Cytochrome P450, family 707, subfamily A, polypeptide 2

AT2G29090.1

 9E-03

Eucgr.B01170

NULL

NULL

 9E-03

Eucgr.C02083

Inositol requiring 1-1

AT5G24360.1

 9E-03

Eucgr.H03401

NULL

NULL

E. cladocalyx genes showing significantly higher expression in control (WW)

 4E-08

Eucgr.C03357

Proline extensin-like receptor kinase 1

AT3G24550.1

 3E-07

Eucgr.K00060

Histidine kinase 3

AT1G27320.1

 4E-07

Eucgr.G01856

Disease resistance protein (CC-NBS-LRR class) family

AT1G12290.1

 7E-07

Eucgr.B01068

NULL

NULL

 5E-06

Eucgr.G00716

NULL

NULL

 8E-06

Eucgr.G00693

NB-ARC domain-containing disease resistance protein

AT4G26090.1

 2E-05

Eucgr.F03323

NB-ARC domain-containing disease resistance protein

AT4G27220.1

 2E-05

Eucgr.E02365

Argonaute family protein

AT2G27040.1

 6E-05

Eucgr.H01095

Glycosyl hydrolase 9B13

AT4G02290.1

 7E-05

Eucgr.C02074

Disease resistance protein (TIR-NBS-LRR class), putative

AT1G27180.1

 8E-05

Eucgr.B03139

NULL

AT1G69160.1

 1E-04

Eucgr.J00985

TRICHOME BIREFRINGENCE-LIKE 36

AT3G54260.1

 2E-04

Eucgr.J02446

Pathogenesis-related thaumatin superfamily protein

AT4G38660.1

 4E-04

Eucgr.C03134

Homeodomain GLABROUS 2

AT1G05230.1

 4E-04

Eucgr.G00728

NB-ARC domain-containing disease resistance protein

AT4G27190.1

 4E-04

Eucgr.B00934

NULL

NULL

 4E-04

Eucgr.G02885

Soybean gene regulated by cold-2

AT1G09070.1

 5E-04

Eucgr.K00184

Gibberellin 20 oxidase 2

AT5G51810.1

 5E-04

Eucgr.G02880

Soybean gene regulated by cold-2

AT1G09070.1

 6E-04

Eucgr.D02419

NULL

NULL

 1E-03

Eucgr.E02922

Disease resistance protein (TIR-NBS-LRR class), putative

NULL

 1E-03

Eucgr.B00168

Pectin lyase-like superfamily protein

AT5G17680.1

 1E-03

Eucgr.E02195

NULL

AT4G24780.1

 1E-03

Eucgr.G00729

NULL

NULL

 3E-03

Eucgr.K02098

Stomagen

AT4G12970.1

 3E-03

Eucgr.A00170

Ankyrin repeat family protein

AT1G03670.1

 4E-03

Eucgr.I02127

#N/A

#N/A

 5E-03

Eucgr.E01171

HXXXD-type acyl-transferase family protein

AT1G31490.1

 5E-03

Eucgr.B03742

Cytochrome P450 superfamily protein

AT5G07990.1

 5E-03

Eucgr.G02938

Expansin A4

AT2G39700.1

 6E-03

Eucgr.G03078

LOB domain-containing protein 21

AT3G11090.1

 6E-03

Eucgr.B00859

B-S glucosidase 44

AT3G18080.1

 6E-03

Eucgr.I01620

Senescence-related gene 3

AT3G02040.1

 7E-03

Eucgr.C03260

Subtilase family protein

NULL

 7E-03

Eucgr.G01048

NULL

AT2G05920.1

 8E-03

Eucgr.E00994

BTB/POZ domain-containing protein

AT5G57130.1

 8E-03

Eucgr.C00101

Clp amino terminal domain-containing protein

AT4G08455.1

 9E-03

Eucgr.A01603

NULL

NULL

 9E-03

Eucgr.E02293

Disease resistance protein (TIR-NBS-LRR class), putative

AT5G17680.1

 9E-03

Eucgr.G01683

Cryptochrome-interacting basic-helix-loop-helix 1

AT4G34530.1

 9E-03

Eucgr.K02082

Leucine-rich repeat protein kinase family protein

AT2G36570.1

E. globulus genes showing significantly higher expression in control (WW)

 2E-10

Eucgr.H02300

20S proteasome beta subunit G1

AT1G56450.1

 8E-06

Eucgr.H02302

20S proteasome beta subunit G1

AT1G56450.1

 2E-03

Eucgr.F01172

Endoribonuclease/protein kinase IRE1-like

AT5G57850.1

 3E-03

Eucgr.F00613

NB-ARC domain-containing disease resistance protein

AT2G17520.1

 5E-03

Eucgr.A02524

NB-ARC domain-containing disease resistance protein

AT3G14470.1

 7E-03

Eucgr.E00650

NULL

AT4G23493.1

  1. Genes showing significantly higher species specific expression (FDR < 0.01) in either the water deficit (SS) treatment or control (WW) in both E. cladocalyx and E. globulus from most to least significant