Table 3 The SNPs within miRNA mature sequences and their frequencies
From: Genome-wide analysis of microRNA targeting impacted by SNPs in cucumber genome
miRNA | Snp position* | Base frequency (%)* |
|---|---|---|
miR164a | 14 | C(40%);G(56%);-(4%) |
miR166 | 4 | G(83%);A(9%);R(8%) |
miR395 | 20 | C(91%);S(4%);-(4%);G(1%) |
miR396d | 16 | C(94%);G(4%);-(1%);-(1%) |
csa-mir4 | 6 | G(96%);-(3%);A(1%) |
csa-mir11 | 21 | T(71%);C(24%);Y(3%);-(2%) |
csa-mir22 | 3 | G(98%);A(2%) |
csa-mir24 | 6 | A(92%);R(7%);-(1%) |
csa-mir27 | 18 | C(90%);Y(9%);-(1%) |
csa-mir27 | 21 | G(91%) K(9%) |
csa-mir33 | 15 | T(83%);K(6%);G(4%);-(7%) |
csa-mir38 | 2 | A(64%);G(21%);R(10%);-(5%) |
csa-mir39 | 12 | T(96%);-(2%);C(2%) |
csa-mir40 | 12 | C(60%);T(32%);R(4%);-(4%) |
csa-mir40 | 15 | C(77%);T(18%);-(4%);-(1%) |
csa-mir42 | 14 | T(91%);C(6%);R(3%) |
csa-mir43 | 6 | C(98%);M(1%);A(1%) |
csa-mir44 | 8 | T(92%);C(8%) |
csa-mir48 | 10 | G(76%);A(20%);R(4%) |