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Fig. 2 | BMC Genomics

Fig. 2

From: Poplar stem transcriptome is massively remodelled in response to single or repeated mechanical stimuli

Fig. 2

List of transcription factor families whose members are differentially expressed in response to bending. The PlantTFDB database [29] was used to identify the TF-encoding genes and their family among DEG. The family assignment rules based on the detection of pre-set domains in gene sequences identified 33 TF families (among the 58 different families defined for poplar in PlantTFDB). When a TF family appeared less than 5 times in DEG, it was classified into the “other” category. The SIG family, not present in PlantTFDB, was revealed by Phytozome data

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