Fig. 4

Comparison of Pgt-wheat gene co-expression networks. a A diagram of the analysis pipeline used to generate the combined GO sub-networks from each isolate-specific GCN. b. The example of combined network composed of three nodes the are conserved between both networks, and two nodes that are unique to the RKQQC- and MCCFC-specific networks. In this example, edges a, b, and c are first order edges for node CON1, while d, e, and f are second order edges for the same node. In this example, only edge a is conserved between the two isolate-specific networks. A sub-network for node CON1 contains nodes CON2, RKQQC, and MCCFC, but excludes CON3 because it doesn’t have a first order edge connecting it to CON1. The edges of the CON1 sub-network include edges a, b, c, and d, but exclude e and f because they connect with a node outside of the sub-network