Table 1 Statistics from assembly of the mock balanced community
From: Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies
Assembly | metaSPAdes | IDBA-UD | metaVelvet | MEGAHIT | Omega |
|---|---|---|---|---|---|
Largest contig | 1072791 | 886024 | 453604 | 566646 | 1304789 |
# misassemblies | 61 | 58 | 21 | 42 | 310 |
Genome fraction (%) | 98.724 | 98.291 | 97.45 | 99.033 | 97.664 |
Number contigs | 1875 | 3245 | 6892 | 2979 | 3051 |
N50 | 109515 | 60486 | 23780 | 66228 | 87111 |